RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ACTR8Q9H981 624 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 ADAP2Q9NPF8 381 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 ERVK13-1Q9NX77 482 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 KCMF1Q9P0J7 381 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 XPR1Q9UBH6 696 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 TMCO1Q9UM00 188 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 NFU1Q9UMS0 254 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 DAPP1Q9UN19 280 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 PPIEQ9UNP9 301 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 TSC22D4Q9Y3Q8 395 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 ANGPTL3Q9Y5C1 460 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 TNPO3Q9Y5L0 923 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 MYO9AB2RTY4 2548 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 CACNA1CQ13936 2221 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 LRBAP50851 2863 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 TRBV11-1A0A0K0K1C0 115 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 CYSRT1A8MQ03 144 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 H0YIV9 168 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 STX16-NPEPL1H3BU86 382 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 PLPP1O14494 284 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 FCHO1O14526 889 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 STX16O14662 325 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SMIM24O75264 130 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SH3BGRLO75368 114 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 RASAL1O95294 804 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SIX3O95343 332 aaPredicted RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 CRYABP02511 175 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 SLPIP03973 132 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SNRPAP09012 282 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 EEF1DP29692 281 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 RAP1GDS1P52306 607 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 ARFIP1P53367 373 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 MLF1P58340 268 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 PHEXP78562 749 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 PMP22Q01453 160 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 OC90Q02509 493 aaPredicted RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 TRAF3Q13114 568 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SLC13A2Q13183 592 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SERTAD2Q14140 314 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 ELAVL1Q15717 326 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 AP5B1Q2VPB7 878 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 TRMT10CQ7L0Y3 403 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 CLNKQ7Z7G1 428 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 TMEM132CQ8N3T6 1108 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 RNF175Q8N4F7 328 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 HORMAD2Q8N7B1 307 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 ACOT4Q8N9L9 421 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 TMEM178AQ8NBL3 297 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 B3GNT7Q8NFL0 401 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 HUS1BQ8NHY5 278 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 NCLNQ969V3 563 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 RGMAQ96B86 450 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 REPS1Q96D71 796 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 PHF21BQ96EK2 531 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 VMP1Q96GC9 406 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SCMH1Q96GD3 660 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SCYL1Q96KG9 808 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 C5orf34Q96MH7 638 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 MTERF1Q99551 399 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 MAPKAP1Q9BPZ7 522 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 MRPL57Q9BQC6 102 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 HES7Q9BYE0 225 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 DEFB126Q9BYW3 111 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 MRPL46Q9H2W6 279 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 OR51B5Q9H339 312 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 TRIM45Q9H8W5 580 aaPredicted RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 IPPKQ9H8X2 491 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 KLHL1Q9NR64 748 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 PNO1Q9NRX1 252 aaKnown RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 ANKRD10Q9NXR5 420 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 PHF11Q9UIL8 331 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 ERRFI1Q9UJM3 462 aaPredicted RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 ZNF223Q9UK11 482 aaPredicted RBP6.54□□□□□ -1.36
YBX3-206ENST00000536823 PCTPQ9UKL6 214 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 SPACA6W5XKT8 324 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 CACNA1DQ01668 2161 aa6.54□□□□□ -1.36
YBX3-206ENST00000536823 ASPDHA6ND91 283 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 A8MT66 165 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 FOXE1O00358 373 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 SAP18O00422 153 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 OR7A17O14581 309 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 RIPK2O43353 540 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CTNSO60931 367 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 EEDO75530 441 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 SLC25A12O75746 678 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 NEURL1O76050 574 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 SEMA3DO95025 777 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 IFNA16P05015 189 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 RPS17P08708 135 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 STSP08842 583 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 RHOXF2BP0C7M4 288 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CPN2P22792 545 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 MST1P26927 711 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 GCAP28676 217 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 LIMS1P48059 325 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 HLCSP50747 726 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CLCN2P51788 898 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms