RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 STEAP1BQ6NZ63 245 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 C11orf88Q6PI97 169 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 TMEM270Q6UE05 265 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 CD164L2Q6UWJ8 174 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 KRT77Q7Z794 578 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 STHQ8IWL8 128 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 TMCO5AQ8N6Q1 288 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 OR6M1Q8NGM8 313 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 GLYATL1Q969I3 302 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 MRPL53Q96EL3 112 aaKnown RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 COG3Q96JB2 828 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 SIGLEC12Q96PQ1 595 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 TTYH2Q9BSA4 534 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 FUNDC2Q9BWH2 189 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 SLC26A1Q9H2B4 701 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 DCLRE1BQ9H816 532 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 AKIRIN1Q9H9L7 192 aaPredicted RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 Q9HAA7 133 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 MAGEF1Q9HAY2 307 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 AMBNQ9NP70 447 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 MYOZ2Q9NPC6 264 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 DDX28Q9NUL7 540 aaKnown RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 VNN3Q9NY84 501 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 TRPC4Q9UBN4 977 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 MLXQ9UH92 298 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 STX8Q9UNK0 236 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 DIMT1Q9UNQ2 313 aaKnown RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 NACAE9PAV3 2078 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 ZNFX1Q9P2E3 1918 aaKnown RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 TRABD2BA6NFA1 517 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 YJEFN3A6XGL0 299 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 KRTAP4-16G5E9R7 235 aaPredicted RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 TSPAN2O60636 221 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 TSC22D2O75157 780 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 AKAP3O75969 853 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 CD1EP15812 388 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 CYP3A5P20815 502 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 MUTP22033 750 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 UCP1P25874 307 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 TRIM23P36406 574 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 MEOX2P50222 304 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 ARHGDIAP52565 204 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 SLC7A2P52569 658 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF133P52736 654 aaPredicted RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 MFAP2P55001 183 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 RPS4XP62701 263 aaKnown RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 HERV-K104P63124 156 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 PPP1R3AQ16821 1122 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 GSG1Q2KHT4 349 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 FUT11Q495W5 492 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 MPPE1Q53F39 396 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 TCHHL1Q5QJ38 904 aaPredicted RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 C9orf129Q5T035 196 aaKnown RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 APOOLQ6UXV4 268 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 TIFABQ6ZNK6 161 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 PRSS48Q7RTY5 328 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 PRSS42Q7Z5A4 293 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 LINC00518Q8N0U6 118 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 ARL14Q8N4G2 192 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 NAT8LQ8N9F0 302 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 OR4A16Q8NH70 328 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 RNASE8Q8TDE3 154 aaKnown RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 ATP6V1E2Q96A05 226 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 JPH2Q9BR39 696 aaPredicted RBP1.93□□□□□ -2.1
BRCA2-205ENST00000533776 ST6GALNAC5Q9BVH7 336 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 SLC5A7Q9GZV3 580 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 PNPLA3Q9NST1 481 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 PRODH2Q9UF12 536 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 FBXW2Q9UKT8 454 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 FGD5Q6ZNL6 1462 aa1.93□□□□□ -2.1
BRCA2-205ENST00000533776 AFF2P51816 1311 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 LRRD1A4D1F6 860 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 C5orf51A6NDU8 294 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 EFCAB7A8K855 629 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 SH2D1BO14796 132 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 REC8O95072 547 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 GOT2P00505 430 aaKnown RBP1.92□□□□□ -2.1
BRCA2-205ENST00000533776 OAS1P00973 400 aaKnown RBP1.92□□□□□ -2.1
BRCA2-205ENST00000533776 FCER2P06734 321 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 MMP10P09238 476 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 GDF1P27539 372 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 ATP5DP30049 168 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 MDH2P40926 338 aaKnown RBP1.92□□□□□ -2.1
BRCA2-205ENST00000533776 MAGEA9P43362 315 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 PAX2Q02962 417 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 CKAP4Q07065 602 aaKnown RBP1.92□□□□□ -2.1
BRCA2-205ENST00000533776 MSLNQ13421 630 aaPredicted RBP1.92□□□□□ -2.1
BRCA2-205ENST00000533776 KLF5Q13887 457 aaPredicted RBP1.92□□□□□ -2.1
BRCA2-205ENST00000533776 SLC10A1Q14973 349 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 SGCBQ16585 318 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF674Q2M3X9 581 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 SMU1Q2TAY7 513 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 AARDQ4LEZ3 155 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 SLC39A12Q504Y0 691 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 EPC2Q52LR7 807 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 SEL1L2Q5TEA6 688 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 CDC42EP5Q6NZY7 148 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 ZCCHC12Q6PEW1 402 aa1.92□□□□□ -2.1
BRCA2-205ENST00000533776 MOB2Q70IA6 237 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms