RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GALNT1Q10472 559 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-211ENST00000533492 SLC29A2Q14542 456 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 NTRK2Q16620 822 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TBCELQ5QJ74 424 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 WLSQ5T9L3 541 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TMEM198Q66K66 360 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 SLC48A1Q6P1K1 146 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TMEM64Q6YI46 380 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 GPRIN3Q6ZVF9 776 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 SLC22A9Q8IVM8 553 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CNPY4Q8N129 248 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 RPRMLQ8N4K4 120 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 C1orf52Q8N6N3 182 aaKnown RBP14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ZNF615Q8N8J6 731 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 OR10Q1Q8NGQ4 319 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 METTL6Q8TCB7 284 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ACMSDQ8TDX5 336 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TM4SF18Q96CE8 201 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-211ENST00000533492 HBEGFQ99075 208 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 BRINP2Q9C0B6 783 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 PSMC3IPQ9P2W1 217 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TNFRSF10DQ9UBN6 386 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 B4GALT7Q9UBV7 327 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TBK1Q9UHD2 729 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 BCAP29Q9UHQ4 241 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ZNF225Q9UK10 706 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 RNF6Q9Y252 685 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CFL2Q9Y281 166 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 NPFFR2Q9Y5X5 522 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CHCHD2Q9Y6H1 151 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-211ENST00000533492 MANBAO00462 879 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 LRATO95237 230 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 FAM153BP0C7A2 387 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 RFPL3SP0C7P2 107 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 HSD3B1P14060 373 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 KRT15P19012 456 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 HSD3B2P26439 372 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 SSTR2P30874 369 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 FEN1P39748 380 aaKnown RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 NUP107P57740 925 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 TRA2BP62995 288 aaKnown RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 RPP38P78345 283 aaKnown RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 RPS6KA2Q15349 733 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 FAM153CQ494X1 144 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 TCHHL1Q5QJ38 904 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 B3GNT6Q6ZMB0 384 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 MEX3BQ6ZN04 569 aaKnown RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 CCDC71Q8IV32 467 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 VWA5B2Q8N398 1253 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 LIX1Q8N485 282 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF441Q8N8Z8 693 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 LILRB4Q8NHJ6 448 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 KLHL29Q96CT2 875 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 TMEM237Q96Q45 408 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF382Q96SR6 550 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 SPOCK3Q9BQ16 436 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 PROK2Q9HC23 129 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 KCNJ16Q9NPI9 418 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 QPCTLQ9NXS2 382 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 FETUBQ9UGM5 382 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 DCDC2Q9UHG0 476 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 CES1P1Q9UKY3 287 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 CNOT11Q9UKZ1 510 aaKnown RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 STK38LQ9Y2H1 464 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF780BQ9Y6R6 833 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 APCP25054 2843 aa14.2□□□□□ -0.14
CPSF1-211ENST00000533492 PHF3Q92576 2039 aaKnown RBP14.2□□□□□ -0.14
CPSF1-211ENST00000533492 CCDC151A5D8V7 595 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 ANKRD33BA6NCL7 494 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 FAM90A27PA6NNH2 459 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 WDR1O75083 606 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 GSTA1P08263 222 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 PYGBP11216 843 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 PRKAA2P54646 552 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 FBXW4P57775 412 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 MAP4K2Q12851 820 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 CSTF3Q12996 717 aaKnown RBP14.19□□□□□ -0.14
CPSF1-211ENST00000533492 FAM111BQ6SJ93 734 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 MMP21Q8N119 569 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 LRRC25Q8N386 305 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-211ENST00000533492 GBP7Q8N8V2 638 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-211ENST00000533492 CHTF18Q8WVB6 975 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 ADIPOR1Q96A54 375 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF597Q96LX8 424 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 TTYH2Q9BSA4 534 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 TRIM8Q9BZR9 551 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 UCK2Q9BZX2 261 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 ENKD1Q9H0I2 346 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 ZNF703Q9H7S9 590 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-211ENST00000533492 ACKR4Q9NPB9 350 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 PFDN4Q9NQP4 134 aa14.19□□□□□ -0.14
CPSF1-211ENST00000533492 GNG14A0A1W2PPG7 69 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 NKX2-6A6NCS4 301 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 TRAPPC6AO75865 159 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 SNX4O95219 450 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 ATP1B1P05026 303 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 HOXD4P09016 255 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-211ENST00000533492 GABRA1P14867 456 aa14.18□□□□□ -0.14
CPSF1-211ENST00000533492 GDF1P27539 372 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms