RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RGS10O43665 173 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SH3BP5O60239 455 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 GCM2O75603 506 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 CCNB2O95067 398 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 GADD45GO95257 159 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CLIC3O95833 236 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 FHP07954 510 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CHRM5P08912 532 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 TFPTP0C1Z6 253 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SLC35G6P0C7Q6 338 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 HNRNPCL4P0DMR1 293 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 F3P13726 295 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 NELFEP18615 380 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 CSNK2A2P19784 350 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 CCNA2P20248 432 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 POU3F3P20264 500 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 ATP5A1P25705 553 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 RPL10P27635 214 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 ELK4P28324 431 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 IFNA8P32881 189 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 BMP8BP34820 402 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MPIP34949 423 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 KRT20P35900 424 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 GGT2P36268 569 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 WASP42768 502 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 RABIFP47224 123 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 LIMS1P48059 325 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CCT3P49368 545 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 ST13P50502 369 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 CRYBA2P53672 197 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CRISP3P54108 245 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 OLR1P78380 273 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SLC35A2P78381 396 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MC1RQ01726 317 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SPIBQ01892 262 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MEF2AQ02078 507 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 COX10Q12887 443 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ILF3Q12906 894 aaKnown RBP eCLIP5.25□□□□□ -1.57
PCF11-205ENST00000530906 PMS2P3Q13401 168 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 TP53BP2Q13625 1128 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 RAPSNQ13702 412 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 LRRC32Q14392 662 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 KIR2DS5Q14953 304 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MAD2L1BPQ15013 274 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 SF1Q15637 639 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 KCNMB1Q16558 191 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MLANAQ16655 118 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ZBTB37Q5TC79 503 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 NDUFAF5Q5TEU4 345 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 XAF1Q6GPH4 301 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 KIAA1211LQ6NV74 962 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 NIPAL1Q6NVV3 410 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SLC48A1Q6P1K1 146 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ABHD17CQ6PCB6 329 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CEP68Q76N32 757 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 C6orf120Q7Z4R8 191 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ADCK2Q7Z695 626 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 TMEM179BQ7Z7N9 219 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ZNF605Q86T29 641 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 FAM124AQ86V42 546 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 AMIGO1Q86WK6 493 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 PAQR7Q86WK9 346 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ANKRD13BQ86YJ7 626 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 P3H2Q8IVL5 708 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ADGRF3Q8IZF5 1079 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 TAGAPQ8N103 731 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SMRP1Q8NCR6 262 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 OR10G2Q8NGC3 310 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 C9orf43Q8TAL5 461 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 SUN3Q8TAQ9 357 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 PHF10Q8WUB8 498 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 APOBEC4Q8WW27 367 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 LCN9Q8WX39 176 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 RORBQ92753 470 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MYDGFQ969H8 173 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CIDECQ96AQ7 238 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 LIN37Q96GY3 246 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 MSLNLQ96KJ4 702 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SLC35G5Q96KT7 338 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 COG8Q96MW5 612 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 AMDHD1Q96NU7 426 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 BBS4Q96RK4 519 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SIGLEC11Q96RL6 698 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 GDF15Q99988 308 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 DPH7Q9BTV6 452 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 POLR2J2Q9GZM3 115 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 RACGAP1Q9H0H5 632 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ABCG4Q9H172 646 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 POLR2J3Q9H1A7 115 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 PCED1AQ9H1Q7 454 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SRMSQ9H3Y6 488 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 RIBC2Q9H4K1 309 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ANKRD19PQ9H560 264 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CXorf36Q9H7Y0 433 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CERS4Q9HA82 394 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 FANCEQ9HB96 536 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ANKHQ9HCJ1 492 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 FGF22Q9HCT0 170 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 TM7SF3Q9NS93 570 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SIRT3Q9NTG7 399 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms