RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ASNA1O43681 348 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 TLX3O43711 291 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 GMNNO75496 209 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 JRKO75564 520 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 LAMP1P11279 417 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 COX6A1P12074 109 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 NAGAP17050 411 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CALB2P22676 271 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SOAT1P35610 550 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CCT3P49368 545 aaKnown RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CLK3P49761 638 aaKnown RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 PGDP52209 483 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SLC26A5P58743 744 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 HSPB3Q12988 150 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 FADDQ13158 208 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF267Q14586 743 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 MYBPC3Q14896 1274 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 MEP1AQ16819 746 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 MPEG1Q2M385 716 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 PRICKLE4Q2TBC4 344 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CRB2Q5IJ48 1285 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 AGAP7PQ5VUJ5 663 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 TMEM198Q66K66 360 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 FAAH2Q6GMR7 532 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 OR4F3Q6IEY1 312 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 LCN10Q6JVE6 187 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CGB2Q6NT52 195 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 BORAQ6PGQ7 559 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 INO80CQ6PI98 192 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 PAOXQ6QHF9 649 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 KIRREL2Q6UWL6 708 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 C16orf89Q6UX73 402 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 HACD2Q6Y1H2 254 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SHISA6Q6ZSJ9 500 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF621Q6ZSS3 439 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 TRPM8Q7Z2W7 1104 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 PPP1R32Q7Z5V6 425 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 LAPTM4BQ86VI4 370 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 MARCH9Q86YJ5 346 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ARHGAP24Q8N264 748 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 OR2L13Q8N349 312 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 DPP10Q8N608 796 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 METTL25Q8N6Q8 603 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SLC2A12Q8TD20 617 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ADAMTS17Q8TE56 1095 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SNRNP27Q8WVK2 155 aaKnown RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CTHRC1Q96CG8 243 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ELP4Q96EB1 424 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 HSPBAP1Q96EW2 488 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SENP5Q96HI0 755 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 NAF1Q96HR8 494 aaKnown RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 AGAP4Q96P64 663 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 PHF12Q96QT6 1004 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 STACQ99469 402 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ARHGAP9Q9BRR9 750 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 G6PC3Q9BUM1 346 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CNPPD1Q9BV87 410 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SEMA4CQ9C0C4 833 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 OR8D2Q9GZM6 311 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 NMUR2Q9GZQ4 415 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 OR10A5Q9H207 317 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ADNPQ9H2P0 1102 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF385DQ9H6B1 395 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 EPS8L2Q9H6S3 715 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 Q9N2J8 555 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 ZCCHC3Q9NUD5 404 aaKnown RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 CALML5Q9NZT1 146 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 NTMQ9P121 344 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 C5AR2Q9P296 337 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 GIMAP2Q9UG22 337 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 BCAP29Q9UHQ4 241 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 TAGLN3Q9UI15 199 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 TUBD1Q9UJT1 453 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 FBXL4Q9UKA2 621 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 PRDM4Q9UKN5 801 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 C19orf53Q9UNZ5 99 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 LIPT1Q9Y234 373 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 YARS2Q9Y2Z4 477 aaKnown RBP7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SNX8Q9Y5X2 465 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 C2orf92A0A1B0GVN3 265 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 MED19A0JLT2 244 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 HS6ST1O60243 411 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 SEC24DO94855 1032 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 STAMBPO95630 424 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ALOX5P09917 674 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ATXN8OSP0DMR3 200 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ESRRAP11474 423 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 COX4I1P13073 169 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 DRD5P21918 477 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 ITGA3P26006 1051 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 KHKP50053 298 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 NME5P56597 212 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 HPCAP84074 193 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 MXRA7P84157 204 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 RHDQ02161 417 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 TLE3Q04726 772 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 EEF1A2Q05639 463 aaKnown RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 GABPB1Q06547 395 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-211ENST00000528787 CHAF1BQ13112 559 aa7.39□□□□□ -1.23
SSBP3-211ENST00000528787 NFYCQ13952 458 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms