RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PIGGQ5H8A4 983 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 Q5PR19 223 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 ARHGAP21Q5T5U3 1957 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 OPN5Q6U736 354 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 TIFABQ6ZNK6 161 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 LCA5Q86VQ0 697 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 KRTAP1-3Q8IUG1 177 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 ST13P4Q8IZP2 240 aaPredicted RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 RNF175Q8N4F7 328 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 PTGR2Q8N8N7 351 aaPredicted RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 KIF18AQ8NI77 898 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 PHF21BQ96EK2 531 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 ART5Q96L15 291 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SERPINI1Q99574 410 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 MRPL57Q9BQC6 102 aaKnown RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 FAM173AQ9BQD7 235 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 YIPF4Q9BSR8 244 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 BDH2Q9BUT1 245 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 C1QTNF3Q9BXJ4 246 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 NOL11Q9H8H0 719 aaKnown RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 IL1RL2Q9HB29 575 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 ZBTB26Q9HCK0 441 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 PRM3Q9NNZ6 103 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■□□□ 14.4
CPSF1-203ENST00000527916 COPS7AQ9UBW8 275 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 PCTPQ9UKL6 214 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 RNF11Q9Y3C5 154 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 MYOCOSA0A1B0GUC4 107 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 A0A1W2PR48 441 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 PINLYPA6NC86 204 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 CLCA1A8K7I4 914 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 POC1B-GALNT4F8VUJ3 575 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 H7C1Q1 480 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 WWP2O00308 870 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TMPRSS11DO60235 418 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 HCN1O60741 890 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 GLSO94925 669 aaPredicted RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 ABHD2P08910 425 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 ALOX15P16050 662 aaPredicted RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 CD53P19397 219 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 SOX3P41225 446 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 MAGEA5P43359 124 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 NEK2P51955 445 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 CCNG1P51959 295 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 PLIN5Q00G26 463 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TBL3Q12788 808 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 HYAL4Q2M3T9 481 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 SPRED3Q2MJR0 410 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 FRG2Q64ET8 278 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 C18orf63Q68DL7 685 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 ADGRD1Q6QNK2 874 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 CYP20A1Q6UW02 462 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 IL20RBQ6UXL0 311 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 C16orf47Q6ZP98 133 aaPredicted RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 RTL4Q6ZR62 310 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TRMT10CQ7L0Y3 403 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 NUDT13Q86X67 352 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 IFT20Q8IY31 132 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 DND1Q8IYX4 353 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TMEM151AQ8N4L1 468 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TMEM251Q8N6I4 163 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF321PQ8N8H1 164 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 OR52B6Q8NGF0 335 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TRPC4APQ8TEL6 797 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 ATP6V1E2Q96A05 226 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 MTBPQ96DY7 904 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 FBXL20Q96IG2 436 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 SCYL1Q96KG9 808 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 FRG2BQ96QU4 278 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 SH3GL2Q99962 352 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 SORBS1Q9BX66 1292 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 MRPL46Q9H2W6 279 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 LIN28AQ9H9Z2 209 aaKnown RBP9.68□□□□□ -0.86
CPSF1-203ENST00000527916 WDR41Q9HAD4 459 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 XPR1Q9UBH6 696 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 ADAM29Q9UKF5 820 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 PCDHGB3Q9Y5G1 929 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 LIPGQ9Y5X9 500 aa9.68□□□□□ -0.86
CPSF1-203ENST00000527916 TRGV5A0A0B4J1U4 118 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 ATP6AP2A0A1C7CYW4 349 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 OR6C76A6NM76 312 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 TRIM49D1C9J1S8 452 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 INAFM1C9JVW0 142 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 SMAD7O15105 426 aaKnown RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 SMPD2O60906 423 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 EEDO75530 441 aaKnown RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 ATP6AP2O75787 350 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 OTCP00480 354 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 RPS17P08708 135 aaKnown RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 SBK3P0C264 359 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 SLC35E2P0CK97 266 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 ID2Q02363 134 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 TRAF3Q13114 568 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF791Q3KP31 576 aaPredicted RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 PAGE2Q7Z2X7 111 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 MILR1Q7Z6M3 343 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 OR4N5Q8IXE1 308 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms