RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 DSTNP60981 165 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 SNRPGP62308 76 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 IFITM3Q01628 133 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 PTSQ03393 145 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 ST3GAL4Q11206 333 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CNTN1Q12860 1018 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 E2F2Q14209 437 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 MED22Q15528 200 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 FNDC3BQ53EP0 1204 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 SOWAHCQ53LP3 525 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 RSBN1Q5VWQ0 802 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 RNLSQ5VYX0 342 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 PLAG1Q6DJT9 500 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 ERAP2Q6P179 960 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CASP12Q6UXS9 341 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 TMPRSS11BQ86T26 416 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CCDC71Q8IV32 467 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC22A15Q8IZD6 547 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 KRT78Q8N1N4 520 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 PARP16Q8N5Y8 322 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 OR7G3Q8NG95 312 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 HUS1BQ8NHY5 278 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 WDR36Q8NI36 951 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 NFKBIDQ8NI38 313 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 WFDC5Q8TCV5 224 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 HCAR2Q8TDS4 363 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CYB5D2Q8WUJ1 264 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 KLHL6Q8WZ60 621 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 NR4A3Q92570 626 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 AP3S1Q92572 193 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 MTERF1Q99551 399 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CHCHD6Q9BRQ6 235 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 C6orf106Q9H6K1 298 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 TMEM165Q9HC07 324 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 MIEF1Q9NQG6 463 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 DMRT3Q9NQL9 472 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 GPR83Q9NYM4 423 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 TAS2R9Q9NYW1 312 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 MARK1Q9P0L2 795 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 RPL36Q9Y3U8 105 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 TMEM131Q92545 1883 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TRBC2A0A5B9 178 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM221BA6H8Z2 402 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ZAR1LA6NP61 321 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GABRR3A8MPY1 467 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 A8MX80 341 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 H3BM21 787 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TLR4O00206 839 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 RGS13O14921 159 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ZW10O43264 779 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 IDH3BO43837 385 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 BNIP3LO60238 219 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 KIAA0513O60268 411 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TBX19O60806 448 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SEMA3DO95025 777 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 VIPP01282 170 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SCG5P05408 212 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 STSP08842 583 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 FURINP09958 794 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GSTT2P0CG29 244 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GSTT2BP0CG30 244 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 HSMCR30P0CW71 290 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GABRB1P18505 474 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ENDOUP21128 410 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 PSMA1P25786 263 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GKP32189 559 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 CA5AP35218 305 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC19A1P41440 591 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SEPHS1P49903 392 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 HMGA2P52926 109 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 CRISP1P54107 249 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 CLDN6P56747 220 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 RPS13P62277 151 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 RAE1P78406 368 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 BNC1Q01954 994 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GNA13Q14344 377 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 NCF4Q15080 339 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 KCNJ8Q15842 424 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TSTQ16762 297 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TMEM44Q2T9K0 475 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 TMEM201Q5SNT2 666 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 CATSPEREQ5SY80 951 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 ARMC4Q5T2S8 1044 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 AGAP6Q5VW22 663 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 REEP3Q6NUK4 255 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 SLCO4C1Q6ZQN7 724 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 DPPA4Q7L190 304 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 COMMD6Q7Z4G1 85 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 DSG4Q86SJ6 1040 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GALNT10Q86SR1 603 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 CCDC190Q86UF4 302 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 VRK3Q8IV63 474 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 LAS2Q8IYD9 372 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 NAGSQ8N159 534 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 AQP11Q8NBQ7 271 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 B3GNT7Q8NFL0 401 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GPR156Q8NFN8 814 aa8.18□□□□□ -1.1
CTNNA1-223ENST00000520520 GANCQ8TET4 914 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms