RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NMRK1Q9NWW6 199 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 AKAP7Q9P0M2 348 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 IL19Q9UHD0 177 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PSORS1C1Q9UIG5 152 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PTBP2Q9UKA9 531 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SPATA2Q9UM82 520 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 STX8Q9UNK0 236 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 AURKCQ9UQB9 309 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 NIP7Q9Y221 180 aaKnown RBP eCLIP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 FOXA2Q9Y261 457 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 AUP1Q9Y679 476 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SYNJ2O15056 1496 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SNAPC4Q5SXM2 1469 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 DIP2BQ9P265 1576 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 KIF7Q2M1P5 1343 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 PCNX3Q9H6A9 2034 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TOPBP1Q92547 1522 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 A0A0A6YYC8 382 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TRGV8A0A0C4DH27 118 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 RGSL1A5PLK6 1076 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OR5H15A6NDH6 313 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 IGLON5A6NGN9 336 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SLC15A5A6NIM6 579 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ACOD1A6NK06 481 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 I3L1I5 382 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 K7EPI3 171 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OGTO15294 1046 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF749O43361 778 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 BUB1O43683 1085 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 AKAP3O75969 853 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OR6B1O95007 311 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 PAHP00439 452 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 PDGFBP01127 241 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 LYNP07948 512 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 CT45A8P0DMV1 189 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 CT45A9P0DMV2 189 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ACADSP16219 412 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF10P21506 573 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 GATA2P23769 480 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 PPP2R1AP30153 589 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 NF2P35240 595 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SOX6P35712 828 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SLC1A6P48664 564 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 HNMTP50135 292 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ATP4BP51164 291 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 BLVRAP53004 296 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 CCNA1P78396 465 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 CD300CQ08708 224 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 LCP2Q13094 533 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 RPA4Q13156 261 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 RIPK1Q13546 671 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 GIT2Q14161 759 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 WDR43Q15061 677 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SIX1Q15475 284 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OR1C1Q15619 314 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TRADDQ15628 312 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SGCBQ16585 318 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ECSCRQ19T08 205 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SLC39A12Q504Y0 691 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 BOLA3Q53S33 107 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 CT45A2Q5DJT8 189 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TCTEX1D4Q5JR98 221 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 MUC21Q5SSG8 566 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ETFRF1Q6IPR1 90 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 NEPROQ6NW34 567 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 MIER3Q7Z3K6 550 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SPATA24Q86W54 205 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 KRT222Q8N1A0 295 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 GVQW1Q8N7I0 195 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 BANPQ8N9N5 519 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 BBOF1Q8ND07 529 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 LPCAT1Q8NF37 534 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OR56B2PQ8NGI1 322 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OR8K3Q8NH51 312 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TCP11Q8WWU5 503 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 RAPGEF5Q92565 580 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 HAS2Q92819 552 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TOMM40LQ969M1 308 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ANKRD27Q96NW4 1050 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TNFRSF13CQ96RJ3 184 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 NAP1L3Q99457 506 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 PLIN2Q99541 437 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SPAG8Q99932 426 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-207ENST00000518569 CCDC28BQ9BUN5 200 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SLC5A7Q9GZV3 580 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 DPH5Q9H2P9 285 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SP140LQ9H930 580 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 TM9SF3Q9HD45 589 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 ANO10Q9NW15 660 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 FBXW2Q9UKT8 454 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 RARRES3Q9UL19 164 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 EXOC7Q9UPT5 735 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 SH3GLB1Q9Y371 365 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 OR1A2Q9Y585 309 aa2.95□□□□□ -1.94
VPS13B-207ENST00000518569 MROH5Q6ZUA9 1318 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 KIF21BO75037 1637 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 H0YCG3 227 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 MAGEB3O15480 346 aa2.94□□□□□ -1.94
VPS13B-207ENST00000518569 POLR2DO15514 142 aaKnown RBP2.94□□□□□ -1.94
VPS13B-207ENST00000518569 B4GAT1O43505 415 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms