RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 ACTL8Q9H568 366 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 WDR55Q9H6Y2 383 aaPredicted RBP8.84□□□□□ -0.99
SNF8-211ENST00000512243 MYNNQ9NPC7 610 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 TCF7L2Q9NQB0 619 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 PRTFDC1Q9NRG1 225 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 TEX10Q9NXF1 929 aaPredicted RBP8.84□□□□□ -0.99
SNF8-211ENST00000512243 ASIC5Q9NY37 505 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 KCMF1Q9P0J7 381 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 C3orf18Q9UK00 162 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 PTPRQQ9UMZ3 2332 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 DLGAP4Q9Y2H0 992 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 WBP11Q9Y2W2 641 aaKnown RBP8.84□□□□□ -0.99
SNF8-211ENST00000512243 ATG4BQ9Y4P1 393 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 MMACHCQ9Y4U1 282 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 PCDHGA6Q9Y5G7 932 aa8.84□□□□□ -0.99
SNF8-211ENST00000512243 MAP1BP46821 2468 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 A0A1W2PR48 441 aa8.83□□□□□ -1
SNF8-211ENST00000512243 C1orf226A1L170 272 aa8.83□□□□□ -1
SNF8-211ENST00000512243 GMNCA6NCL1 334 aa8.83□□□□□ -1
SNF8-211ENST00000512243 SYNDIG1LA6NDD5 238 aa8.83□□□□□ -1
SNF8-211ENST00000512243 IDSB3KWA1 339 aa8.83□□□□□ -1
SNF8-211ENST00000512243 E9PBE3 544 aa8.83□□□□□ -1
SNF8-211ENST00000512243 FAM227AF5H4B4 570 aa8.83□□□□□ -1
SNF8-211ENST00000512243 CYR61O00622 381 aa8.83□□□□□ -1
SNF8-211ENST00000512243 PROM1O43490 865 aa8.83□□□□□ -1
SNF8-211ENST00000512243 KLHL41O60662 606 aa8.83□□□□□ -1
SNF8-211ENST00000512243 SEMA7AO75326 666 aa8.83□□□□□ -1
SNF8-211ENST00000512243 PRKRAO75569 313 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 IGHEP01854 428 aa8.83□□□□□ -1
SNF8-211ENST00000512243 DDX5P17844 614 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 F8A1P23610 371 aa8.83□□□□□ -1
SNF8-211ENST00000512243 EMP2P54851 167 aa8.83□□□□□ -1
SNF8-211ENST00000512243 MC1RQ01726 317 aa8.83□□□□□ -1
SNF8-211ENST00000512243 C2orf80Q0P641 193 aa8.83□□□□□ -1
SNF8-211ENST00000512243 SLC13A2Q13183 592 aa8.83□□□□□ -1
SNF8-211ENST00000512243 ERV3-1Q14264 604 aa8.83□□□□□ -1
SNF8-211ENST00000512243 LSM12Q3MHD2 195 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 BROXQ5VW32 411 aa8.83□□□□□ -1
SNF8-211ENST00000512243 C18orf63Q68DL7 685 aa8.83□□□□□ -1
SNF8-211ENST00000512243 CGB2Q6NT52 195 aa8.83□□□□□ -1
SNF8-211ENST00000512243 MED25Q71SY5 747 aa8.83□□□□□ -1
SNF8-211ENST00000512243 MTERF4Q7Z6M4 381 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 CLNKQ7Z7G1 428 aa8.83□□□□□ -1
SNF8-211ENST00000512243 RAB43Q86YS6 212 aa8.83□□□□□ -1
SNF8-211ENST00000512243 FAM9CQ8IZT9 166 aa8.83□□□□□ -1
SNF8-211ENST00000512243 CLHC1Q8NHS4 586 aa8.83□□□□□ -1
SNF8-211ENST00000512243 METTL21AQ8WXB1 218 aa8.83□□□□□ -1
SNF8-211ENST00000512243 STARD8Q92502 1023 aa8.83□□□□□ -1
SNF8-211ENST00000512243 TM4SF18Q96CE8 201 aa8.83□□□□□ -1
SNF8-211ENST00000512243 RILPQ96NA2 401 aa8.83□□□□□ -1
SNF8-211ENST00000512243 OR52B2Q96RD2 323 aa8.83□□□□□ -1
SNF8-211ENST00000512243 EBF4Q9BQW3 602 aa8.83□□□□□ -1
SNF8-211ENST00000512243 TMEM120AQ9BXJ8 343 aa8.83□□□□□ -1
SNF8-211ENST00000512243 RPF2Q9H7B2 306 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
SNF8-211ENST00000512243 LANCL2Q9NS86 450 aa8.83□□□□□ -1
SNF8-211ENST00000512243 GIMAP4Q9NUV9 329 aa8.83□□□□□ -1
SNF8-211ENST00000512243 AIG1Q9NVV5 245 aa8.83□□□□□ -1
SNF8-211ENST00000512243 KLHL14Q9P2G3 628 aa8.83□□□□□ -1
SNF8-211ENST00000512243 TNFRSF10DQ9UBN6 386 aa8.83□□□□□ -1
SNF8-211ENST00000512243 C19orf25Q9UFG5 118 aaPredicted RBP8.83□□□□□ -1
SNF8-211ENST00000512243 IL17BQ9UHF5 180 aa8.83□□□□□ -1
SNF8-211ENST00000512243 MAPRE3Q9UPY8 281 aa8.83□□□□□ -1
SNF8-211ENST00000512243 PCDHA9Q9Y5H5 950 aa8.83□□□□□ -1
SNF8-211ENST00000512243 MRPS18BQ9Y676 258 aaKnown RBP8.83□□□□□ -1
SNF8-211ENST00000512243 DOCK10Q96BY6 2186 aa8.83□□□□□ -1
SNF8-211ENST00000512243 MED13Q9UHV7 2174 aa8.82□□□□□ -1
SNF8-211ENST00000512243 GLOD5A6NK44 160 aa8.82□□□□□ -1
SNF8-211ENST00000512243 ZNF891A8MT65 544 aaPredicted RBP8.82□□□□□ -1
SNF8-211ENST00000512243 PCDH17O14917 1159 aa8.82□□□□□ -1
SNF8-211ENST00000512243 UBDO15205 165 aa8.82□□□□□ -1
SNF8-211ENST00000512243 ALOX12BO75342 701 aa8.82□□□□□ -1
SNF8-211ENST00000512243 CREG1O75629 220 aa8.82□□□□□ -1
SNF8-211ENST00000512243 KLF7O75840 302 aaPredicted RBP8.82□□□□□ -1
SNF8-211ENST00000512243 LRATO95237 230 aa8.82□□□□□ -1
SNF8-211ENST00000512243 UMODP07911 640 aa8.82□□□□□ -1
SNF8-211ENST00000512243 ALDOCP09972 364 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 C8orf89P0DMQ9 161 aa8.82□□□□□ -1
SNF8-211ENST00000512243 G6PDP11413 515 aa8.82□□□□□ -1
SNF8-211ENST00000512243 IDO1P14902 403 aa8.82□□□□□ -1
SNF8-211ENST00000512243 DDCP20711 480 aa8.82□□□□□ -1
SNF8-211ENST00000512243 DRD4P21917 467 aa8.82□□□□□ -1
SNF8-211ENST00000512243 TACR1P25103 407 aa8.82□□□□□ -1
SNF8-211ENST00000512243 PIK3R1P27986 724 aa8.82□□□□□ -1
SNF8-211ENST00000512243 OTX2P32243 289 aa8.82□□□□□ -1
SNF8-211ENST00000512243 RPL3P39023 403 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 HNRNPFP52597 415 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 ARFIP2P53365 341 aa8.82□□□□□ -1
SNF8-211ENST00000512243 SEC24CP53992 1094 aa8.82□□□□□ -1
SNF8-211ENST00000512243 HSD17B7P56937 341 aa8.82□□□□□ -1
SNF8-211ENST00000512243 FOXL2P58012 376 aa8.82□□□□□ -1
SNF8-211ENST00000512243 STX1BP61266 288 aa8.82□□□□□ -1
SNF8-211ENST00000512243 RHAGQ02094 409 aa8.82□□□□□ -1
SNF8-211ENST00000512243 ACTN3Q08043 901 aaPredicted RBP8.82□□□□□ -1
SNF8-211ENST00000512243 STX4Q12846 297 aa8.82□□□□□ -1
SNF8-211ENST00000512243 SF3A3Q12874 501 aaKnown RBP eCLIP8.82□□□□□ -1
SNF8-211ENST00000512243 SRSF6Q13247 344 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 RPS6KA2Q15349 733 aa8.82□□□□□ -1
SNF8-211ENST00000512243 GSTA3Q16772 222 aa8.82□□□□□ -1
SNF8-211ENST00000512243 FAM69BQ5VUD6 431 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms