RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 HNRNPCL3B7ZW38 293 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LOC110117498-PIK3R3F6TDL0 507 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 H7BYZ3 331 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPL36A-HNRNPH2H7BZ11 118 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 H7C4K7 107 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDX4O14627 284 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 XPO1O14980 1071 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LDLRAD4O15165 306 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALOX12BO75342 701 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TOM1L1O75674 476 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGFG2O95081 481 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NFATC1O95644 943 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 IFNA21P01568 189 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLKB1P03952 638 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SFTPBP07988 381 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM58BPP0C7Q3 252 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HNRNPCL4P0DMR1 293 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LIPCP11150 499 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATP6V1B1P15313 513 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LAG3P18627 525 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TPSB2P20231 275 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCND1P24385 295 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 S100PP25815 95 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PTPN4P29074 926 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PDHA2P29803 388 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HNF1BP35680 557 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MEOX1P50221 254 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF143P52747 638 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DUSP2Q05923 314 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FOXD4Q12950 439 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TDGQ13569 410 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TPSAB1Q15661 275 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DUSP7Q16829 419 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C2orf68Q2NKX9 166 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PGS1Q32NB8 556 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C2orf76Q3KRA6 126 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM133BQ5BKY9 247 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZMAT1Q5H9K5 638 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PAGE2BQ5JRK9 111 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATAT1Q5SQI0 421 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC35F1Q5T1Q4 408 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TTC39BQ5VTQ0 682 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARL9Q6T311 187 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SUSD1Q6UWL2 747 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LCLAT1Q6UWP7 414 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NPNTQ6UXI9 565 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPATC1Q76KD6 591 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIWIL3Q7Z3Z3 882 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MTDHQ86UE4 582 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ANKMY2Q8IV38 441 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TPH2Q8IWU9 490 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPIL6Q8IXY8 311 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TIGD4Q8IY51 512 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MYOCDQ8IZQ8 938 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HS3ST5Q8IZT8 346 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF321PQ8N8H1 164 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR9I1Q8NGQ6 314 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 VANGL1Q8TAA9 524 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C9orf43Q8TAL5 461 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CPA5Q8WXQ8 436 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIK3R3Q92569 461 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF845Q96IR2 970 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PGLYRP3Q96LB9 341 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NSMCE2Q96MF7 247 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 APOL4Q9BPW4 351 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 APOL5Q9BWW9 433 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HDHD5Q9BXW7 423 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MRPL9Q9BYD2 267 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BHLHE41Q9C0J9 482 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SUV39H2Q9H5I1 410 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BRD9Q9H8M2 597 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PARD6AQ9NPB6 346 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TLR8Q9NR97 1041 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CHST12Q9NRB3 414 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DUSP22Q9NRW4 184 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLCXD1Q9NUJ7 323 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TBCCD1Q9NVR7 557 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF226Q9NYT6 803 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 KCNE5Q9UJ90 142 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNMT3LQ9UJW3 386 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP8B1Q9UNU6 501 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 JAG2Q9Y219 1238 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EIF3LQ9Y262 564 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 COL6A5A8TX70 2615 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C15orf38-AP3S2A0A0A6YYH1 394 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 A0A1B0GVC2 190 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MEX3AA1L020 520 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DBX1A6NMT0 343 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 A8MU76 341 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 C1QTNF3-AMACRE9PGA6 284 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TOR1BO14657 336 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HAT1O14929 419 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PSTPIP1O43586 416 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 VPS26AO75436 327 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 VAPBO95292 243 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EOMESO95936 686 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 IGHEP01854 428 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 COX4I1P13073 169 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LCP1P13796 627 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 IRF2P14316 349 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms