RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 PCDHGB2Q9Y5G2 931 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 A0A0A6YYC8 382 aaPredicted RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 I3L1I5 382 aaPredicted RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 J3QRK9 145 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CAPN3P20807 821 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 S1PR1P21453 382 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 MAOBP27338 520 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CRISP1P54107 249 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 SRYQ05066 204 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CLCA4Q14CN2 919 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PTPRRQ15256 657 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 ZNF423Q2M1K9 1284 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 FAM26DQ5JW98 314 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 LCTLQ6UWM7 567 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 ENDOVQ8N8Q3 282 aaKnown RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 TOR1AIP2Q8NFQ8 470 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CEP76Q8TAP6 659 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 WDR20Q8TBZ3 569 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 HDAC2Q92769 488 aaKnown RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 ZNF559Q9BR84 538 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 WACQ9BTA9 647 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 MCOLN1Q9GZU1 580 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TRPV4Q9HBA0 871 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 ITGB4P16144 1822 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 A0A0J9YY10 115 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 H0YAE9 185 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PLOD2O00469 737 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 AREL1O15033 823 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 SCGB1D2O95969 90 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PTGER1P34995 402 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 MC3RP41968 323 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CXCL12P48061 93 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CBFBQ13951 182 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TMEM236Q5W0B7 351 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 LYSMD4Q5XG99 296 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TANGO2Q6ICL3 276 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 ZC3H14Q6PJT7 736 aaKnown RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 OR2L2Q8NH16 312 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 METTL8Q9H825 291 aaKnown RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 IL20RAQ9UHF4 553 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 MEMO1Q9Y316 297 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 NUMBLQ9Y6R0 609 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PRAMEF2O60811 474 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 KDM4BO94953 1096 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 SOX30O94993 753 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 P04436 131 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 C1SP09871 688 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PSMB5P28074 263 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 SLC15A1P46059 708 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 GJA8P48165 433 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 HK3P52790 923 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TPTEP56180 551 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TUBA1BP68363 451 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TUBA4AP68366 448 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 RGNQ15493 299 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 OCLNQ16625 522 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CTSL3PQ5NE16 218 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 FIP1L1Q6UN15 594 aaKnown RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 TUBA1AQ71U36 451 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PAQR7Q86WK9 346 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 FOXRED2Q8IWF2 684 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CCDC36Q8IYA8 594 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PRR22Q8IZ63 422 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 CCDC107Q8WV48 283 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 GATAD2BQ8WXI9 593 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 HS6ST2Q96MM7 605 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 RDH12Q96NR8 316 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 LPAR4Q99677 370 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 TTYH1Q9H313 450 aaPredicted RBP8.61□□□□□ -1.03
NEK1-207ENST00000511633 NANSQ9NR45 359 aa8.61□□□□□ -1.03
NEK1-207ENST00000511633 PDE4DIPQ5VU43 2346 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 A0A0G2JPF8 293 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 VSTM2BA6NLU5 285 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 HNRNPCL3B7ZW38 293 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 FLRT2O43155 660 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 HPRP00739 348 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 PRH1P02810 166 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 HNRNPCL4P0DMR1 293 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 ENDOUP21128 410 aaKnown RBP8.6□□□□□ -1.03
NEK1-207ENST00000511633 GALNT1Q10472 559 aaPredicted RBP8.6□□□□□ -1.03
NEK1-207ENST00000511633 ALG10BQ5I7T1 473 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 PAGE3Q5JUK9 113 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 TMEM31Q5JXX7 168 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 RPL13AP3Q6NVV1 102 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 TMED4Q7Z7H5 227 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 ZNF611Q8N823 705 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 NLGN4YQ8NFZ3 816 aaPredicted RBP8.6□□□□□ -1.03
NEK1-207ENST00000511633 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 S100A16Q96FQ6 103 aaKnown RBP8.6□□□□□ -1.03
NEK1-207ENST00000511633 SLC22A12Q96S37 553 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 MROQ9BYG7 248 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 BRF2Q9HAW0 419 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 TIGARQ9NQ88 270 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 AASSQ9UDR5 926 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 CDH10Q9Y6N8 788 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 MYH4Q9Y623 1939 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 SLC9B1P1A6NJY1 282 aa8.6□□□□□ -1.03
NEK1-207ENST00000511633 NME4O00746 187 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms