RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 DNAJB6O75190 326 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 SERPINB7O75635 380 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PGM3O95394 542 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 MED26O95402 600 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 AK1P00568 194 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 MYF5P13349 255 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ITGA2P17301 1181 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 KCNAB1Q14722 419 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 TAF11Q15544 211 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 LPAL2Q16609 132 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PRICKLE4Q2TBC4 344 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF750Q32MQ0 723 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 RHBDD2Q6NTF9 364 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 MFSD12Q6NUT3 480 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ZC3H7AQ8IWR0 971 aaKnown RBP14.26□□□□□ -0.13
SCLT1-209ENST00000511426 SVOPLQ8N434 492 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PMM1Q92871 262 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 COL26A1Q96A83 441 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 GIMAP5Q96F15 307 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 TMEM19Q96HH6 336 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PRRX2Q99811 253 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 Q9H521 79 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF639Q9UID6 485 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 D6RAR5 112 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 OR10H2O60403 315 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 LDB3O75112 727 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 GCM2O75603 506 aaPredicted RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 LDOC1O95751 146 aaPredicted RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 CST1P01037 141 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 FABP3P05413 133 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 BCHEP06276 602 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF806P0C7X5 589 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 NT5EP21589 574 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 MAN2A2P49641 1150 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 STX4Q12846 297 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 SLC13A2Q13183 592 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 FHL5Q5TD97 284 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 QSOX2Q6ZRP7 698 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 ZBTB49Q6ZSB9 765 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 TTLL10Q6ZVT0 673 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 AMIGO2Q86SJ2 522 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 ZDHHC21Q8IVQ6 265 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 SLITRK4Q8IW52 837 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 FAM86B1Q8N7N1 296 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 CDRT4Q8N9R6 151 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 TMEM52Q8NDY8 209 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 OR7G2Q8NG99 324 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 GEMIN6Q8WXD5 167 aaKnown RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 SDCCAG3Q96C92 435 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 RBM18Q96H35 190 aaKnown RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 PEX11GQ96HA9 241 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 HSH2DQ96JZ2 352 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 CNDP2Q96KP4 475 aaKnown RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 TRNT1Q96Q11 434 aaKnown RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 STACQ99469 402 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 SERHL2Q9H4I8 314 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 TRIM45Q9H8W5 580 aaPredicted RBP14.25□□□□□ -0.13
SCLT1-209ENST00000511426 DUSP22Q9NRW4 184 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 MAT2BQ9NZL9 334 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 HCN3Q9P1Z3 774 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 RAB26Q9ULW5 256 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 SATB2Q9UPW6 733 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 V9GYQ6 96 aa14.25□□□□□ -0.13
SCLT1-209ENST00000511426 A0A0G2JPF8 293 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 LNP1A1A4G5 178 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 HNRNPCL2B2RXH8 293 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 HNRNPCL3B7ZW38 293 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 M0QX08 132 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 HNRNPCL4P0DMR1 293 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 OR12D1P0DN82 309 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 NR2F1P10589 423 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF26P17031 533 aaPredicted RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 XCR1P46094 333 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 PRKAG1P54619 331 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 IL11RAQ14626 422 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 LTB4RQ15722 352 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 NKG7Q16617 165 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 LRRC36Q1X8D7 754 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 IFI44LQ53G44 452 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 EXOSC6Q5RKV6 272 aaKnown RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 HEPHL1Q6MZM0 1159 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 GALNT12Q8IXK2 581 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 VWA5B2Q8N398 1253 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 OR2I1PQ8NGU4 316 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 ADAMTS15Q8TE58 950 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 NAF1Q96HR8 494 aaKnown RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 CCDC74BQ96LY2 380 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 OR7D2Q96RA2 312 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF347Q96SE7 839 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 TMEM121BQ9BXQ6 578 aaPredicted RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF304Q9HCX3 659 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 MKKSQ9NPJ1 570 aaPredicted RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 THSD1Q9NS62 852 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 SIDT1Q9NXL6 827 aaKnown RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 TRPC4Q9UBN4 977 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 RARRES3Q9UL19 164 aa14.24□□□□□ -0.13
SCLT1-209ENST00000511426 ATXN7L1Q9ULK2 861 aaPredicted RBP14.24□□□□□ -0.13
SCLT1-209ENST00000511426 A8MU76 341 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 FAM227AF5H4B4 570 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms