RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM222BQ8WU58 562 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 DNASE1L2Q92874 299 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 SLC45A3Q96JT2 553 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 TSSK2Q96PF2 358 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 CITED2Q99967 270 aaPredicted RBP4.75□□□□□ -1.65
NIPBL-203ENST00000503274 UPF3BQ9BZI7 483 aaKnown RBP4.75□□□□□ -1.65
NIPBL-203ENST00000503274 RAB9BQ9NP90 201 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 NRBP2Q9NSY0 501 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 BAIAP2L1Q9UHR4 511 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 KLK13Q9UKR3 277 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 COL1A2P08123 1366 aa4.75□□□□□ -1.65
NIPBL-203ENST00000503274 ADGRA3Q8IWK6 1321 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MUC6Q6W4X9 2439 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 ESYT2A0FGR8 921 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 C5orf67F2Z3F1 127 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 G3V2L1 256 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 CPLX1O14810 134 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MAGEB2O15479 319 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 PI15O43692 258 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MT-ND2P03891 347 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 CD52P31358 61 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 OR3A3P47888 321 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MGAT3Q09327 533 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MARCH8Q5T0T0 291 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MPP7Q5T2T1 576 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MEX3DQ86XN8 651 aaKnown RBP4.74□□□□□ -1.65
NIPBL-203ENST00000503274 CCDC185Q8N715 623 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 RPLP0P6Q8NHW5 317 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MIPOL1Q8TD10 442 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 FAM122AQ96E09 287 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 JAKMIP1Q96N16 626 aaKnown RBP4.74□□□□□ -1.65
NIPBL-203ENST00000503274 PYGO2Q9BRQ0 406 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 ZNF577Q9BSK1 485 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 THUMPD3Q9BV44 507 aaKnown RBP4.74□□□□□ -1.65
NIPBL-203ENST00000503274 ZNF302Q9NR11 478 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 NLGN3Q9NZ94 848 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 GINS2Q9Y248 185 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 MMP24Q9Y5R2 645 aa4.74□□□□□ -1.65
NIPBL-203ENST00000503274 IGSF9BQ9UPX0 1349 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 IGKV6D-21A0A0A0MT36 114 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 IQCMA0A1B0GVH7 501 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 ERI2A8K979 691 aaKnown RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 DDX39AO00148 427 aaKnown RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 NXPH4O95158 308 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 RLN1P04808 185 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 AOC1P19801 751 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 C4BPBP20851 252 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 EDNRAP25101 427 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SHC1P29353 583 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SFNP31947 248 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 GPR183P32249 361 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SOAT1P35610 550 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 CRYBB1P53674 252 aaPredicted RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 RBP5P82980 135 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 PAX8Q06710 450 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 ITGB3BPQ13352 177 aaPredicted RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 TCEAL5Q5H9L2 206 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 GALNT17Q6IS24 598 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 KLHL10Q6JEL2 608 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 GPRIN3Q6ZVF9 776 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 TRMT11Q7Z4G4 463 aaKnown RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 CREBRFQ8IUR6 639 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SIX6OS1Q8N1H7 587 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 FBXL16Q8N461 479 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 METTL13Q8N6R0 699 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 RSPH1Q8WYR4 309 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 CORO2AQ92828 525 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SGF29Q96ES7 293 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 LURAP1Q96LR2 239 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 TCEANC2Q96MN5 208 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 GAL3ST4Q96RP7 486 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 PARLQ9H300 379 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 C5orf66Q9H5L9 145 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 GPN1Q9HCN4 374 aaPredicted RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SH3GLB2Q9NR46 395 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 PDRG1Q9NUG6 133 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 NOCTQ9UK39 431 aaKnown RBP4.73□□□□□ -1.65
NIPBL-203ENST00000503274 ITGA11Q9UKX5 1188 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SATB2Q9UPW6 733 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 NCKAP1Q9Y2A7 1128 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 SIP14410 1827 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 DOCK5Q9H7D0 1870 aa4.73□□□□□ -1.65
NIPBL-203ENST00000503274 WDFY4Q6ZS81 3184 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 A0A0B4J203 849 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 RNF103O00237 685 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 PGRMC2O15173 223 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 MMP1P03956 469 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 DLATP10515 647 aaKnown RBP4.72□□□□□ -1.65
NIPBL-203ENST00000503274 GOT1P17174 413 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 GIFP27352 417 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 ERVK-16P61578 105 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 BFSP1Q12934 665 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 PPA1Q15181 289 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 MS4A18Q3C1V0 323 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 ZNF770Q6IQ21 691 aaPredicted RBP4.72□□□□□ -1.65
NIPBL-203ENST00000503274 MSANTD1Q6ZTZ1 278 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 RUFY3Q7L099 469 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 GALNTL5Q7Z4T8 443 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 TEX26Q8N6G2 289 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 RIT2Q99578 217 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms