RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 IL10P22301 178 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SERPINA4P29622 427 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CDH5P33151 784 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 GALNSP34059 522 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 EVI2BP34910 448 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 MMP12P39900 470 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FASLGP48023 281 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ETV1P50549 477 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ARSFP54793 590 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 POLR2GP62487 172 aaKnown RBP eCLIP4.26□□□□□ -1.73
MATR3-202ENST00000502422 ZNF33BQ06732 778 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 TNK1Q13470 666 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PWP1Q13610 501 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 RIN1Q13671 783 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CDO1Q16878 200 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PLA2G4EQ3MJ16 856 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PRR30Q53SZ7 412 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 SYT6Q5T7P8 510 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 SP5Q6BEB4 398 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 LIPIQ6XZB0 460 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 NRARPQ7Z6K4 114 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 P2RY8Q86VZ1 359 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 RFX6Q8HWS3 928 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 WFDC8Q8IUA0 241 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PLXDC1Q8IUK5 500 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FUNDC1Q8IVP5 155 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ACVR1CQ8NER5 493 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FBLIM1Q8WUP2 373 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 DEDD2Q8WXF8 326 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 NT5C3BQ969T7 300 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FBXW5Q969U6 566 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 LGALS12Q96DT0 336 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 OR2A14Q96R47 310 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 OR6C1Q96RD1 312 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 NODALQ96S42 347 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 TRAF4Q9BUZ4 470 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 UCK2Q9BZX2 261 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ING2Q9H160 280 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 MMP27Q9H306 513 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SERHL2Q9H4I8 314 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 IFT22Q9H7X7 185 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FARSBQ9NSD9 589 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 TMEM248Q9NWD8 314 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 KCTD5Q9NXV2 234 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PAK5Q9P286 719 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SNX7Q9UNH6 387 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PCDHGB6Q9Y5F9 930 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PCDHGA9Q9Y5G4 932 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 KLF2Q9Y5W3 355 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 CSMD2Q7Z408 3487 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PCSK5Q92824 1860 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ITPR3Q14573 2671 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 A0A0B4J293 547 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 MEIOCA2RUB1 952 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ARGFXA6NJG6 315 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ZNF487B1APH4 448 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 TARM1B6A8C7 271 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SLCO1B7G3V0H7 640 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SLC1A7O00341 560 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 RTCAO00442 366 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 H2AFYO75367 372 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 SRP72O76094 671 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 IL33O95760 270 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 MT-ND1P03886 318 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CEACAM5P06731 702 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 GPIP06744 558 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SNRPB2P08579 225 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 MTHFD1P11586 935 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 ZNF28P17035 718 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ITGA2P17301 1181 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ALOX12P18054 663 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PSMA4P25789 261 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 ITGA3P26006 1051 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 TYK2P29597 1187 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PIGAP37287 484 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ETV6P41212 452 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ALDH3A2P51648 485 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PER3P56645 1201 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ISL1P61371 349 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 RPS15P62841 145 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 RPS26P62854 115 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 SNRPNP63162 240 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 ZNF45Q02386 682 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 BCL2L1Q07817 233 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 DBPQ10586 325 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 FAPQ12884 760 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CHAF1BQ13112 559 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PRKAA1Q13131 559 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FADDQ13158 208 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 IKZF1Q13422 519 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 NFATC2Q13469 925 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 KRR1Q13601 381 aaKnown RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 ZNF404Q494X3 552 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PTPN20Q4JDL3 420 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 GPAT3Q53EU6 434 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 AGKQ53H12 422 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 OTUD1Q5VV17 481 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms