RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CCDC184Q52MB2 194 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 ACER2Q5QJU3 275 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 PRAMEF7Q5VXH5 474 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 BNIPLQ7Z465 357 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 SERINC5Q86VE9 423 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 ERICH1Q86X53 443 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 BATF2Q8N1L9 274 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 CENPSQ8N2Z9 138 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 SFRP1Q8N474 314 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 OR52J3Q8NH60 311 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 ZNF671Q8TAW3 534 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 RNASE8Q8TDE3 154 aaKnown RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 MRPL53Q96EL3 112 aaKnown RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 MCCC1Q96RQ3 725 aaPredicted RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 RSPH9Q9H1X1 276 aaPredicted RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 ABCG8Q9H221 673 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 TMEM245Q9H330 911 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 THAP9Q9H5L6 903 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 HPS4Q9NQG7 708 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 PIGVQ9NUD9 493 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 PRR34Q9NV39 138 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 ARMCX1Q9P291 453 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 FAM153AQ9UHL3 310 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 TSPAN16Q9UKR8 245 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 SPATA2Q9UM82 520 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 STRAPQ9Y3F4 350 aaKnown RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 TRBV2A0A0J9YWF9 115 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ARHGAP42A6NI28 874 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 EFCAB7A8K855 629 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 TLR4O00206 839 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 CYB561D2O14569 222 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 FRAT2O75474 233 aaPredicted RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 PRAMEF12O95522 483 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 RENP00797 406 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 PDGFBP01127 241 aaPredicted RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 PROS1P07225 676 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ABHD2P08910 425 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 SNRPCP09234 159 aaKnown RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 GHRP10912 638 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 GNSP15586 552 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 FNTAP49354 379 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 HNRNPFP52597 415 aaKnown RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 RAG2P55895 527 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 SRP54P61011 504 aaKnown RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 C17orf67Q0P5P2 114 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 HAGHQ16775 308 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 HKDC1Q2TB90 917 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ANKRD55Q3KP44 614 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 CCDC40Q4G0X9 1142 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 VITQ6UXI7 678 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 MOB2Q70IA6 237 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 MIER3Q7Z3K6 550 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 TSEN54Q7Z6J9 526 aaKnown RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 ITIH5Q86UX2 942 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ZNF713Q8N859 430 aaPredicted RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 ZNRF1Q8ND25 227 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 CCNYQ8ND76 341 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 OR6T1Q8NGN1 323 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 OR4F5Q8NH21 305 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ZPLD1Q8TCW7 415 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 PNPLA2Q96AD5 504 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 RUFY1Q96T51 708 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 Q9HAA7 133 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ADGRL4Q9HBW9 690 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 PNPLA3Q9NST1 481 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 DHRS4-AS1Q9P1J3 65 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 RCOR3Q9P2K3 495 aaPredicted RBP2.56□□□□□ -2
PSPC1-205ENST00000497722 TUBGCP4Q9UGJ1 667 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 RNF24Q9Y225 148 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 ATG4BQ9Y4P1 393 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 FKBP7Q9Y680 259 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 FGD5Q6ZNL6 1462 aa2.56□□□□□ -2
PSPC1-205ENST00000497722 A0A087WWV3 80 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 ZNF840PA6NDX5 716 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 KBTBD11O94819 623 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 SEMA4FO95754 770 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 HCKP08631 526 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 UMPSP11172 480 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 UCP1P25874 307 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 MAGEA9P43362 315 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 NUMBP49757 651 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 TKTL1P51854 596 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 CNN1P51911 297 aaKnown RBP2.55□□□□□ -2
PSPC1-205ENST00000497722 NDST1P52848 882 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 CASP9P55211 416 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 NLRP11P59045 1033 aaKnown RBP2.55□□□□□ -2
PSPC1-205ENST00000497722 KRTAP12-2P59991 146 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 NAAAQ02083 359 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 WASHC5Q12768 1159 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 CLPPQ16740 277 aaPredicted RBP2.55□□□□□ -2
PSPC1-205ENST00000497722 PPP1R3AQ16821 1122 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 PCK2Q16822 640 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 TIMM50Q3ZCQ8 353 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 ATAD3CQ5T2N8 411 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 TATDN1Q6P1N9 297 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 RFWD3Q6PCD5 774 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 CD177Q8N6Q3 437 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 COLGALT1Q8NBJ5 622 aa2.55□□□□□ -2
PSPC1-205ENST00000497722 EXOC6Q8TAG9 804 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms