RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RAET1EQ8TD07 263 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 GPR148Q8TDV2 347 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 APOBEC4Q8WW27 367 aaKnown RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 SPRYD4Q8WW59 207 aaPredicted RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 EMG1Q92979 244 aaKnown RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 FBXO32Q969P5 355 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 NT5C3BQ969T7 300 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 AZIN2Q96A70 460 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 SENP5Q96HI0 755 aaPredicted RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 PCED1BQ96HM7 432 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 HPDLQ96IR7 371 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 PIWIL1Q96J94 861 aaKnown RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 ST6GAL2Q96JF0 529 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 PKNOX2Q96KN3 472 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 NKX3-1Q99801 234 aaPredicted RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 ZPBPQ9BS86 351 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 TDRD1Q9BXT4 1180 aaKnown RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 FNDC4Q9H6D8 234 aaPredicted RBP3.92□□□□□ -1.78
GTF3A-208ENST00000493903 APMAPQ9HDC9 416 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 MED17Q9NVC6 651 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 HYPKQ9NX55 129 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 POMT2Q9UKY4 750 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 RNF6Q9Y252 685 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 SLCO1B1Q9Y6L6 691 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 CNTLNQ9NXG0 1405 aa3.92□□□□□ -1.78
GTF3A-208ENST00000493903 KIDINS220Q9ULH0 1771 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 ARHGAP5Q13017 1502 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 ITSN2Q9NZM3 1697 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 LOC105371242A0A075B767 164 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 FAM240BA0A1B0GVZ2 78 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 GSAPA4D1B5 854 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 NPIPA2E9PIF3 369 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 LMO7DNF2Z398 122 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 SLC1A7O00341 560 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 SH2D1BO14796 132 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 PLXNC1O60486 1568 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 TSPAN2O60636 221 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 JAK2O60674 1132 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 MBD3O95983 291 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 TSHBP01222 138 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 EDN1P05305 212 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 SLC35G4P0C7Q5 338 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 FAM157CP0CG43 387 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 ZNF44P15621 663 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 FEN1P39748 380 aaKnown RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 OR3A2P47893 321 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 FHITP49789 147 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 PDLIM4P50479 330 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 RPL23AP62750 156 aaKnown RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 NUCB2P80303 420 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 EXOSC2Q13868 293 aaKnown RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 KLF5Q13887 457 aaPredicted RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 MXD4Q14582 209 aaPredicted RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 HAGHQ16775 308 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 EXOC3L2Q2M3D2 409 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 CFAP221Q4G0U5 840 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 TECRLQ5HYJ1 363 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 TTC23Q5W5X9 447 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 BLOC1S2Q6QNY1 142 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 Q6ZRG5 221 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 P4HA3Q7Z4N8 544 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 ITIH5Q86UX2 942 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 ARFGAP2Q8N6H7 521 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 MAB21L3Q8N8X9 362 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 OR5AU1Q8NGC0 362 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 OR4D10Q8NGI6 311 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 PNPT1Q8TCS8 783 aaKnown RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 ZNRF4Q8WWF5 429 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 SORCS1Q8WY21 1168 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 TMEM143Q96AN5 459 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 OMA1Q96E52 524 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 COG3Q96JB2 828 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 NEURL4Q96JN8 1562 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 LRR1Q96L50 414 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 PSD2Q9BQI7 771 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 TBC1D10AQ9BXI6 508 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 NFKBIZQ9BYH8 718 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 NLNQ9BYT8 704 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 PKIBQ9C010 78 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 KAT8Q9H7Z6 458 aaKnown RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 FN3KRPQ9HA64 309 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 STARD5Q9NSY2 213 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 GDAP2Q9NXN4 497 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 CLEC4AQ9UMR7 237 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 KLHDC2Q9Y2U9 406 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 CEP170BQ9Y4F5 1589 aaPredicted RBP3.91□□□□□ -1.78
GTF3A-208ENST00000493903 PREX2Q70Z35 1606 aa3.91□□□□□ -1.78
GTF3A-208ENST00000493903 LRRIQ1Q96JM4 1722 aa3.9□□□□□ -1.78
GTF3A-208ENST00000493903 CDC42BPBQ9Y5S2 1711 aa3.9□□□□□ -1.78
GTF3A-208ENST00000493903 TROQ12816 1431 aaPredicted RBP3.9□□□□□ -1.78
GTF3A-208ENST00000493903 PTPRKQ15262 1439 aa3.9□□□□□ -1.78
GTF3A-208ENST00000493903 hCG_38984A0A1B0GV85 526 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 FAM47DPA6NHR8 397 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 PCP4L1A6NKN8 68 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 SHISA7A6NL88 538 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 MEI4A8MW99 385 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 E9PBE3 544 aa3.9□□□□□ -1.79
GTF3A-208ENST00000493903 CTAGE5O15320 804 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms