RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 MYO7AQ13402 2215 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 URADA6NGE7 173 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 AXIN1O15169 862 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 B4GALT2O60909 372 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MED26O95402 600 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PTHP01270 115 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 WASP42768 502 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 KIAA1024LP59773 190 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 COPZ1P61923 177 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 FGL2Q14314 439 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MED22Q15528 200 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 CEBPEQ15744 281 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SYPL1Q16563 259 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM44Q2T9K0 475 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 KLHL22Q53GT1 634 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 ATAT1Q5SQI0 421 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MFSD4BQ5TF39 518 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM236Q5W0B7 351 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PGBD2Q6P3X8 592 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MTSS1LQ765P7 747 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 FAM26EQ8N5C1 309 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 GALNT6Q8NCL4 622 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PROKR2Q8NFJ6 384 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TOR1AIP2Q8NFQ8 470 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 WDR36Q8NI36 951 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 VANGL1Q8TAA9 524 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SNRNP27Q8WVK2 155 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 GAL3ST3Q96A11 431 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 CHFRQ96EP1 664 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TRNT1Q96Q11 434 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 OR2M4Q96R27 311 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 FUZQ9BT04 418 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SP140LQ9H930 580 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 ZBTB20Q9HC78 741 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 CPNE5Q9HCH3 593 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SELENONQ9NZV5 590 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 C5AR2Q9P296 337 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SEC14L4Q9UDX3 406 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 A4GNTQ9UNA3 340 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 NCKAP1Q9Y2A7 1128 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 AGAP5A6NIR3 686 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 ERAL1O75616 437 aaKnown RBP9.1□□□□□ -0.95
NPHP3-209ENST00000493732 SCG5P05408 212 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 HSMCR30P0CW71 290 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF10P21506 573 aaPredicted RBP9.1□□□□□ -0.95
NPHP3-209ENST00000493732 PSMA1P25786 263 aaKnown RBP9.1□□□□□ -0.95
NPHP3-209ENST00000493732 BUD31P41223 144 aaPredicted RBP9.1□□□□□ -0.95
NPHP3-209ENST00000493732 KIR2DL1P43626 348 aaPredicted RBP9.1□□□□□ -0.95
NPHP3-209ENST00000493732 SMSP52788 366 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 RELAQ04206 551 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 ENTPD8Q5MY95 495 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF425Q6IV72 752 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 FAM180BQ6P0A1 224 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 C1orf94Q6P1W5 598 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF793Q6ZN11 406 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 PLEKHG7Q6ZR37 379 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 AMIGO1Q86WK6 493 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 NRROSQ86YC3 692 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM145Q8NBT3 493 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 SLC7A13Q8TCU3 470 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 GABRG3Q99928 467 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 SERHL2Q9H4I8 314 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 XKR8Q9H6D3 395 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 SLC6A20Q9NP91 592 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 SERGEFQ9UGK8 458 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 CKAP5Q14008 2032 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 COL4A3Q01955 1670 aa9.1□□□□□ -0.95
NPHP3-209ENST00000493732 C2orf16Q68DN1 1984 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 A0A075B6Q4 140 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3DA0A087WVF3 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3IA0A087WXS9 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3EA0A087X179 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3KA0A087X1G2 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 LOC100506127A0A0U1RQW1 187 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 A0A1W2PR48 441 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3FA6NER0 549 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ISM1B1AKI9 464 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3LB9A6J9 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 HAT1O14929 419 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PROM1O43490 865 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ENTPD6O75354 484 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 UPK1BO75841 260 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SNX4O95219 450 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 AIFM1O95831 613 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 FUCA1P04066 466 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 HMGN2P05204 90 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SLC35G6P0C7Q6 338 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D3HP0C7X1 549 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 F3P13726 295 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ENDOUP21128 410 aaKnown RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 TLX1P31314 330 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-209ENST00000493732 IGFALSP35858 605 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PCYT1AP49585 367 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 LIMK1P53667 647 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 PRKAG1P54619 331 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 ST3GAL3Q11203 375 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 HYAL2Q12891 473 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 SEC23BQ15437 767 aa9.09□□□□□ -0.95
NPHP3-209ENST00000493732 GPAT3Q53EU6 434 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms