RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ROPN1Q9HAT0 212 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 DEPPQ9NTK1 212 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ALKBH4Q9NXW9 302 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 PRODH2Q9UF12 536 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 BCAP29Q9UHQ4 241 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 PCDHA9Q9Y5H5 950 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 NPFFR2Q9Y5X5 522 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 NOTCH2Q04721 2471 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 ANKRD33BA6NCL7 494 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 ESPNB1AK53 854 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 AQP7O14520 342 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 WISP2O76076 250 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 OR4F21O95013 312 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 IGHG3P01860 377 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 SNRPB2P08579 225 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 CCL3P10147 92 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 MYL2P10916 166 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 DRD2P14416 443 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 NAGAP17050 411 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 ACVR2AP27037 513 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 CRHR1P34998 444 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 PIGAP37287 484 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 PRKAA2P54646 552 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 DCAF7P61962 342 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 PSPHP78330 225 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 LCP2Q13094 533 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 IMPG1Q17R60 797 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF678Q5SXM1 525 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 SLC48A1Q6P1K1 146 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 B3GNT6Q6ZMB0 384 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 TRILQ7L0X0 811 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 CCDC63Q8NA47 563 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 L3HYPDHQ96EM0 354 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 DMRTA2Q96SC8 542 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF382Q96SR6 550 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 TEX10Q9NXF1 929 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 TUBA8Q9NY65 449 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 TMEM216Q9P0N5 145 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 SENP1Q9P0U3 644 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 TBK1Q9UHD2 729 aa15.27■□□□□ 0.04
PDLIM2-217ENST00000491330 DIDO1Q9BTC0 2240 aaKnown RBP15.27■□□□□ 0.03
PDLIM2-217ENST00000491330 MANBAO00462 879 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 GLSO94925 669 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 SBK3P0C264 359 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 PYGBP11216 843 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 KRT20P35900 424 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 PMPCAQ10713 525 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 FUT7Q11130 342 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 NTRK2Q16620 822 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 ERCC6LQ2NKX8 1250 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 PRAMEF20Q5VT98 475 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 CLYBLQ8N0X4 340 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 LRRC25Q8N386 305 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 C1orf52Q8N6N3 182 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 CCNYL1Q8N7R7 359 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 CAVIN3Q969G5 261 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 HSPBAP1Q96EW2 488 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 SPOCK3Q9BQ16 436 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 IQCGQ9H095 443 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 MKS1Q9NXB0 559 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 MCM8Q9UJA3 840 aa15.26■□□□□ 0.03
PDLIM2-217ENST00000491330 COL12A1Q99715 3063 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 A0A1B0GVC2 190 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 ACOX3O15254 700 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 ATP1B1P05026 303 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 TSPAN8P19075 237 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 GDF1P27539 372 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 GRNP28799 593 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 SSTR4P31391 388 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 MPIP34949 423 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 MAP4K2Q12851 820 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 TOMM20Q15388 145 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 SPDYAQ5MJ70 313 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 LETMD1Q6P1Q0 360 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 DGAT2L6Q6ZPD8 337 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 GSPT2Q8IYD1 628 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 OR10G3Q8NGC4 313 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 OR5M9Q8NGP3 310 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 LILRB4Q8NHJ6 448 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 ERP27Q96DN0 273 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 METTL7AQ9H8H3 244 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 ACKR4Q9NPB9 350 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 UTS2RQ9UKP6 389 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 PCDHGB3Q9Y5G1 929 aa15.25■□□□□ 0.03
PDLIM2-217ENST00000491330 PINLYPA6NC86 204 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 WASHC1A8K0Z3 465 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 GOLGA8RI6L899 631 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 HRKO00198 91 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 PCDH7O60245 1069 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 DLX3O60479 287 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 TRAPPC6AO75865 159 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 NADKO95544 446 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 CAPN3P20807 821 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 ELAVL4P26378 380 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 FEN1P39748 380 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 DNAJB13P59910 316 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 VSNL1P62760 191 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 MRPS22P82650 360 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 UNC50Q53HI1 259 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms