RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CXCL8P10145 99 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 FGF3P11487 239 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 GNSP15586 552 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TPH1P17752 444 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PGAM1P18669 254 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CYP3A5P20815 502 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 DGKAP23743 735 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 GIFP27352 417 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PIK3R1P27986 724 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SDC4P31431 198 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 RYKP34925 604 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CDKN2CP42773 168 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CSRP3P50461 194 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CLCN5P51795 746 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 DGKEP52429 567 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 HNRNPFP52597 415 aaKnown RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF135P52742 658 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 IST1P53990 364 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 AQP5P55064 265 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CSNK2A1P68400 391 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 IRX4P78413 519 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SP4Q02446 784 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SPOCK1Q08629 439 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PMPCAQ10713 525 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 STX3Q13277 289 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TP53BP2Q13625 1128 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 KRT81Q14533 505 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 HEPACAMQ14CZ8 416 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CHI3L2Q15782 390 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 ZBTB6Q15916 424 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SNAPC1Q16533 368 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 HSDL1Q3SXM5 330 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 AMZ1Q400G9 498 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 RABL3Q5HYI8 236 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PCID2Q5JVF3 399 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SPANXN3Q5MJ09 141 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TCHHL1Q5QJ38 904 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TEDDM1Q5T9Z0 273 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PRAMEF5Q5TYX0 476 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PRAMEF6Q5VXH4 476 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 NCR3LG1Q68D85 454 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 LAIR1Q6GTX8 287 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM71Q6P5X7 295 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 BRAT1Q6PJG6 821 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TRMT1LQ7Z2T5 733 aaKnown RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PAGE2Q7Z2X7 111 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 ABI3BPQ7Z7G0 1075 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CDR2LQ86X02 465 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PLD3Q8IV08 490 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 VRK3Q8IV63 474 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 LRRC52Q8N7C0 313 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SCAIQ8N9R8 606 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CSNK2A3Q8NEV1 391 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 OR13F1Q8NGS4 319 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 OR2I1PQ8NGU4 316 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 RNASE8Q8TDE3 154 aaKnown RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 GLYATL2Q8WU03 294 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 FAM172AQ8WUF8 416 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 ARNTL2Q8WYA1 636 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 RFT1Q96AA3 541 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF707Q96C28 371 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 RRNAD1Q96FB5 475 aaKnown RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 HPDLQ96IR7 371 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PLEKHA8Q96JA3 519 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 HSFY1Q96LI6 401 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 KLHL15Q96M94 604 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 BTBD9Q96Q07 612 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PANX3Q96QZ0 392 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 KLF6Q99612 283 aaPredicted RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SNRNP25Q9BV90 132 aaKnown RBP3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CALN1Q9BXU9 219 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SEMA4CQ9C0C4 833 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 IL22Q9GZX6 179 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SPATC1LQ9H0A9 340 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 S1PR5Q9H228 398 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TOR3AQ9H497 397 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 FBXO44Q9H4M3 255 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SMYD3Q9H7B4 428 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM185BQ9H7F4 350 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 CATSPERBQ9H7T0 1116 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SYNPO2LQ9H987 977 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 S100A14Q9HCY8 104 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 NDUFA13Q9P0J0 144 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SERGEFQ9UGK8 458 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 PRSS50Q9UI38 385 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 ENPP5Q9UJA9 477 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 EMCNQ9ULC0 261 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 KCNK6Q9Y257 313 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SCN4AP35499 1836 aa3.8□□□□□ -1.8
PRPF38B-205ENST00000485810 SMIM31A0A1B0GVY4 71 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 A0A1W2PR48 441 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TYW5A2RUC4 315 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 RAB19A4D1S5 217 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ERI2A8K979 691 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM114B3SHH9 223 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TLR4O00206 839 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CYB561D2O14569 222 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ANKRD28O15084 1053 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SCAMP2O15127 329 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF264O43296 627 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms