RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 NSFP46459 744 aaKnown RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 GYG1P46976 350 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 CLCN4P51793 760 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 SLC12A3P55017 1021 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 CDH18Q13634 790 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 CEACAM7Q14002 265 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 KRT31Q15323 416 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 EXT1Q16394 746 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 SHROOM1Q2M3G4 852 aaPredicted RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 SGSM1Q2NKQ1 1148 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 CCDC152Q4G0S7 254 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 ATP1A1-AS1Q5TC04 95 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 OR4C11Q6IEV9 310 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 PSRC1Q6PGN9 363 aaPredicted RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 GET4Q7L5D6 327 aaPredicted RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 CHMP1BQ7LBR1 199 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 P2RY8Q86VZ1 359 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 FBXW8Q8N3Y1 598 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 OR5T2Q8NGG2 359 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 OR13C5Q8NGS8 318 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 OR2T11Q8NH01 316 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 OR6S1Q8NH40 331 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 SPATA18Q8TC71 538 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 MAPK15Q8TD08 544 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 RNASE8Q8TDE3 154 aaKnown RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 CHURC1Q8WUH1 139 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 ZNRF4Q8WWF5 429 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 PRCCQ92733 491 aaPredicted RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 BADQ92934 168 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 FAM46BQ96A09 425 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 EPSTI1Q96J88 318 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 PCDHB18PQ96TA0 734 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 PKP2Q99959 881 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 FUCA2Q9BTY2 467 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 TDRD1Q9BXT4 1180 aaKnown RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 FGFBP2Q9BYJ0 223 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 PUS3Q9BZE2 481 aaKnown RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 ACPTQ9BZG2 426 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 C3orf14Q9HBI5 128 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 SYTL2Q9HCH5 934 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 GPN1Q9HCN4 374 aaPredicted RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 TRIM10Q9UDY6 481 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 EXOC7Q9UPT5 735 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 WDR37Q9Y2I8 494 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 RPH3AQ9Y2J0 694 aaPredicted RBP3.17□□□□□ -1.9
GTF3A-207ENST00000482655 PPP2R2CQ9Y2T4 447 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 TTC28Q96AY4 2481 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 DNAH12Q6ZR08 3092 aa3.17□□□□□ -1.9
GTF3A-207ENST00000482655 E9PQ18 207 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SLC28A1O00337 649 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SYT7O43581 403 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SSX5O60225 188 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 PRPSAP2O60256 369 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 B3GALNT1O75752 331 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 CNMDO75829 334 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SLC4A1P02730 911 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF853P0CG23 659 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 PCP11498 1178 aaKnown RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ANPEPP15144 967 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 EZRP15311 586 aaKnown RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ARF4P18085 180 aaPredicted RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 CYP2B6P20813 491 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 AHCYP23526 432 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 HOXD10P28358 340 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 NOVP48745 357 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 RIPK4P57078 832 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SLC8A3P57103 927 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 YBEYP58557 167 aaPredicted RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 DSCR10P59022 87 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 STARD6P59095 220 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 KRTAP10-3P60369 221 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 GIT2Q14161 759 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 TMEM132DQ14C87 1099 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 PDK1Q15118 436 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 DUSP5Q16690 384 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 LRRC37A5PQ49AS3 106 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 LYPLAL1Q5VWZ2 237 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 BSPRYQ5W0U4 402 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF776Q68DI1 518 aaPredicted RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SNRNP48Q6IEG0 339 aaKnown RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SLC25A47Q6Q0C1 308 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 LEKR1Q6ZMV7 388 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 C17orf107Q6ZR85 190 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ERC1Q8IUD2 1116 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 TEX26Q8N6G2 289 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SIDT2Q8NBJ9 832 aaKnown RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 CCNYQ8ND76 341 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 OR5AP2Q8NGF4 316 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 CASP10Q92851 521 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 TBC1D31Q96DN5 1066 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 OMA1Q96E52 524 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ZNF274Q96GC6 653 aaPredicted RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 NSMCE2Q96MF7 247 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 NECTIN4Q96NY8 510 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 NEDD4LQ96PU5 975 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 XPO4Q9C0E2 1151 aaKnown RBP3.16□□□□□ -1.9
GTF3A-207ENST00000482655 TRPV6Q9H1D0 765 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms