RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 SPPL3Q8TCT6 385 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 HSPA12BQ96MM6 686 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 TM9SF2Q99805 663 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MROQ9BYG7 248 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SLC7A11Q9UPY5 501 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 FUOMA2VDF0 154 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 SLC22A31A6NKX4 558 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 GRXCR1A8MXD5 290 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 BCAT2O15382 392 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-216ENST00000481242 IFNA21P01568 189 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 CD68P34810 354 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-216ENST00000481242 RBM34P42696 430 aaKnown RBP9.02□□□□□ -0.96
GARNL3-216ENST00000481242 CHAF1BQ13112 559 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 GINS1Q14691 196 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 ANKRD54Q6NXT1 300 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 LINGO2Q7L985 606 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 COMMD6Q7Z4G1 85 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 TMEM151BQ8IW70 566 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 JAGN1Q8N5M9 183 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 METTL27Q8N6F8 245 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-216ENST00000481242 CEP76Q8TAP6 659 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 TBX5Q99593 518 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 RBCK1Q9BYM8 510 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 B3GNT4Q9C0J1 378 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF395Q9H8N7 513 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-216ENST00000481242 SNTG1Q9NSN8 517 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 DNMT3BQ9UBC3 853 aaKnown RBP9.02□□□□□ -0.96
GARNL3-216ENST00000481242 RGPD5Q99666 1765 aa9.02□□□□□ -0.96
GARNL3-216ENST00000481242 A0A075B6Q4 140 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SH3D21A4FU49 640 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 TFECO14948 347 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 OR2T1O43869 369 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF432O94892 652 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 IFNA7P01567 189 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 OR2B6P58173 313 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ABRAXAS2Q15018 415 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 FAM78AQ5JUQ0 283 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF283Q8N7M2 679 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 EDAQ92838 391 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 RHBDF1Q96CC6 855 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ZFP3Q96NJ6 502 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 MS4A4EQ96PG1 132 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 HDHD5Q9BXW7 423 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 NANSQ9NR45 359 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SPO11Q9Y5K1 396 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 C5P01031 1676 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 LINC01553A4QN01 128 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SMAD6O43541 496 aaKnown RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 CDC123O75794 336 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SLITRK5O94991 958 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 HCKP08631 526 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ADORA3P0DMS8 318 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ICAM2P13598 275 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 IL1RNP18510 177 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 EN2P19622 333 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SHC2P98077 582 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 DLX2Q07687 328 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 KANK2Q63ZY3 851 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SLC44A3Q8N4M1 653 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 AGBL5Q8NDL9 886 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF548Q8NEK5 533 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 OR7G3Q8NG95 312 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 CD200R1Q8TD46 325 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 C16orf78Q8WTQ4 265 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 NKD1Q969G9 470 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 PEX11GQ96HA9 241 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 PDLIM5Q96HC4 596 aaKnown RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 HHIPQ96QV1 700 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 OR1F2PQ96R84 312 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SLA2Q9H6Q3 261 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 AMBNQ9NP70 447 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 B3GNT3Q9Y2A9 372 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 SIT1Q9Y3P8 196 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 UNC119BA6NIH7 251 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 J3QLW9 94 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 FOXE1O00358 373 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 VILLO15195 856 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 CACNG3O60359 315 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 PGAM2P15259 253 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF19P17023 458 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 OTX2P32243 289 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 CSTF1Q05048 431 aaKnown RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 MALLQ13021 153 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 OCLNQ16625 522 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 C3P1Q6ZMU1 363 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 GPR149Q86SP6 731 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 ARHGAP12Q8IWW6 846 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 GPR137CQ8N3F9 429 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 NSUN5Q96P11 429 aaKnown RBP9.02□□□□□ -0.97
GARNL3-216ENST00000481242 PKP2Q99959 881 aa9.02□□□□□ -0.97
GARNL3-216ENST00000481242 A0A1B0GTW7 788 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 BOLA2-SMG1P6H3BVE0 249 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ABLIM3O94929 683 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 RPP14O95059 124 aaKnown RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 UBL4AP11441 157 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 CD72P21854 359 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PRLHRP49683 370 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 MLF2Q15773 248 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms