RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 XKR7Q5GH72 579 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 CCNYL2Q5T2Q4 361 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 OR4C11Q6IEV9 310 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 PAMR1Q6UXH9 720 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 PRSS41Q7RTY9 318 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 TRIM46Q7Z4K8 759 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 KRTAP1-3Q8IUG1 177 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 CPSF7Q8N684 471 aaKnown RBP13.5□□□□□ -0.25
USP11-207ENST00000478596 STT3BQ8TCJ2 826 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 GPATCH1Q9BRR8 931 aaKnown RBP13.5□□□□□ -0.25
USP11-207ENST00000478596 SIKE1Q9BRV8 207 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 SORBS1Q9BX66 1292 aaKnown RBP13.5□□□□□ -0.25
USP11-207ENST00000478596 MEAF6Q9HAF1 191 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 GIMAP2Q9UG22 337 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 TEKT2Q9UIF3 430 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 SLC22A7Q9Y694 548 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
USP11-207ENST00000478596 CPAMD8Q8IZJ3 1885 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 IGHV1-45A0A0A0MS14 117 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 GMNCA6NCL1 334 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 C4orf51C9J302 202 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 LSM1O15116 133 aaKnown RBP13.49□□□□□ -0.25
USP11-207ENST00000478596 RAF1P04049 648 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 KLK1P06870 262 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 CELA2AP08217 269 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 ZGLP1P0C6A0 271 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 ITGAMP11215 1152 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 HIST1H1TP22492 207 aaPredicted RBP13.49□□□□□ -0.25
USP11-207ENST00000478596 TIA1P31483 386 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP11-207ENST00000478596 OR1D4P47884 311 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 SEC24CP53992 1094 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 EMP3P54852 163 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 HYAL2Q12891 473 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 MAD2L1Q13257 205 aaPredicted RBP13.49□□□□□ -0.25
USP11-207ENST00000478596 FAM53BQ14153 422 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 ADPRMQ3LIE5 342 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 UGT3A2Q3SY77 523 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 RNF165Q6ZSG1 346 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 CDC20BQ86Y33 519 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 OR2T11Q8NH01 316 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 RND1Q92730 232 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 MVB12AQ96EY5 273 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 SCMH1Q96GD3 660 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 COX4I2Q96KJ9 171 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 SERINC2Q96SA4 455 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 RBCK1Q9BYM8 510 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 WDR55Q9H6Y2 383 aaPredicted RBP13.49□□□□□ -0.25
USP11-207ENST00000478596 ZNF304Q9HCX3 659 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 TCF7L2Q9NQB0 619 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 LYARQ9NX58 379 aaKnown RBP13.49□□□□□ -0.25
USP11-207ENST00000478596 TRPC4Q9UBN4 977 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 FBXW2Q9UKT8 454 aa13.49□□□□□ -0.25
USP11-207ENST00000478596 EIF3LQ9Y262 564 aaKnown RBP13.49□□□□□ -0.25
USP11-207ENST00000478596 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 SDHDO14521 159 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 GALR3O60755 368 aaPredicted RBP13.48□□□□□ -0.25
USP11-207ENST00000478596 ATE1O95260 518 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 TGDSO95455 350 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 NSA2O95478 260 aaKnown RBP13.48□□□□□ -0.25
USP11-207ENST00000478596 TPOP07202 933 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 ICAM2P13598 275 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 LBPP18428 481 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 ATP5A1P25705 553 aaKnown RBP13.48□□□□□ -0.25
USP11-207ENST00000478596 STX1BP61266 288 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 OCA2Q04671 838 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 METTL4Q8N3J2 472 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 DTWD1Q8N5C7 304 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 ACOT4Q8N9L9 421 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 GOT1L1Q8NHS2 421 aaPredicted RBP13.48□□□□□ -0.25
USP11-207ENST00000478596 RFWD2Q8NHY2 731 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 FAM57AQ8TBR7 257 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 MIEF2Q96C03 454 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 APIPQ96GX9 242 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 C3orf30Q96M34 536 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 TMEM120AQ9BXJ8 343 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 WDR41Q9HAD4 459 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 PSD3Q9NYI0 1048 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 NOP53Q9NZM5 478 aaKnown RBP13.48□□□□□ -0.25
USP11-207ENST00000478596 ZNF282Q9UDV7 671 aaPredicted RBP13.48□□□□□ -0.25
USP11-207ENST00000478596 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 TMED5Q9Y3A6 229 aa13.48□□□□□ -0.25
USP11-207ENST00000478596 TLN2Q9Y4G6 2542 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 IGLV3-12A0A075B6K2 115 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 E9PBE3 544 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 H0YIG0 161 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 GUCY1B2O75343 617 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 EEDO75530 441 aaKnown RBP13.47□□□□□ -0.25
USP11-207ENST00000478596 MED26O95402 600 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
USP11-207ENST00000478596 RNH1P13489 461 aaKnown RBP13.47□□□□□ -0.25
USP11-207ENST00000478596 CPN2P22792 545 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
USP11-207ENST00000478596 ALDH9A1P49189 494 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 ARFIP2P53365 341 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 ERVK-8P63133 956 aa13.47□□□□□ -0.25
USP11-207ENST00000478596 PPP2R2BQ00005 443 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms