RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PRPF4O43172 522 aaKnown RBP eCLIP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PSMD3O43242 534 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PROM1O43490 865 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 LIASO43766 372 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PEX1O43933 1283 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 KLK8O60259 260 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF354AO60765 605 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM127O75204 238 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 VPS26AO75436 327 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 NDUFS3O75489 264 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PDE9AO76083 593 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 VAPBO95292 243 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TSPAN12O95859 305 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 FTCDO95954 541 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 LPLP06858 475 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TPOP07202 933 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 APRTP07741 180 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 CYC1P08574 325 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ATP5DP30049 168 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ADSLP30566 484 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 CHRNB4P30926 498 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 RPL22P35268 128 aaKnown RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 SKIV2L2P42285 1042 aaKnown RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TTPAP49638 278 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 HLCSP50747 726 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 GPR143P51810 404 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PGGT1BP53609 377 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TPM4P67936 248 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 OC90Q02509 493 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PMPCAQ10713 525 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ARHGAP19Q14CB8 494 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 MLC1Q15049 377 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TMED2Q15363 201 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 NSDHLQ15738 373 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 CEBPEQ15744 281 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 EXT1Q16394 746 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 MST1LQ2TV78 715 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 P3H1Q32P28 736 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PCID2Q5JVF3 399 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 MFSD4BQ5TF39 518 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TTC23LQ6PF05 361 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 RAD9BQ6WBX8 426 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PPP1R21Q6ZMI0 780 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PIWIL4Q7Z3Z4 852 aaKnown RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 LINC00523Q86TU6 105 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 MPP5Q8N3R9 675 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ZFP62Q8NB50 900 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM178AQ8NBL3 297 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 APCDD1LQ8NCL9 501 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF740Q8NDX6 193 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ACRBPQ8NEB7 543 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 C1orf54Q8WWF1 131 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 METTL21AQ8WXB1 218 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PMM1Q92871 262 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PEX13Q92968 403 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 RERGQ96A58 199 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PANX3Q96QZ0 392 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 FERMT1Q9BQL6 677 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF559Q9BR84 538 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 MRI1Q9BV20 369 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 KIFC1Q9BW19 673 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 DEFB127Q9H1M4 99 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 NECTIN3Q9NQS3 549 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PNPLA3Q9NST1 481 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 TRMT1Q9NXH9 659 aaKnown RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 KCNN3Q9UGI6 736 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 PLEKHA6Q9Y2H5 1048 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 NAALAD2Q9Y3Q0 740 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 FAM215AQ9Y5M1 114 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 IGKV3D-11A0A0A0MRZ8 115 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 A0A1W2PPR1 153 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SAGE2PA6NJ88 616 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 A8MUA0 341 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 BTNL10A8MVZ5 291 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 NPIPA2E9PIF3 369 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 NPIPA3F8WFD2 350 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 G3V3Y1 287 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TXNDC9O14530 226 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TFECO14948 347 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SLC16A5O15375 505 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CHST10O43529 356 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 KIF5CO60282 957 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CDC40O60508 579 aaKnown RBP eCLIP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 GALR3O60755 368 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 B4GALT2O60909 372 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 AVILO75366 819 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 IFNB1P01574 187 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PTMAP06454 111 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 FHP07954 510 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SMIM10L1P0DMW3 83 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 MYBL2P10244 700 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CDH1P12830 882 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PKMP14618 531 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 NPPBP16860 134 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CHRM3P20309 590 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 MAOAP21397 527 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PPP2R1BP30154 601 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 FDFT1P37268 417 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms