RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 DGCR14Q96DF8 476 aaKnown RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 MVB12AQ96EY5 273 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CNDP2Q96KP4 475 aaKnown RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 STACQ99469 402 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TREX2Q9BQ50 279 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 TUBA1CQ9BQE3 449 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 DUSP23Q9BVJ7 150 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PINK1Q9BXM7 581 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 GABARAPL3Q9BY60 117 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 POLR2J2Q9GZM3 115 aaKnown RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 POLR2J3Q9H1A7 115 aaKnown RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 MIR1-1HGQ9H1L0 117 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 OR51I1Q9H343 314 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PDE7BQ9NP56 450 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 POLE3Q9NRF9 147 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 KRT84Q9NSB2 600 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 C2orf42Q9NWW7 574 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PDP1Q9P0J1 537 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 TRPC4Q9UBN4 977 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 SEC14L3Q9UDX4 400 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 KCND3Q9UK17 655 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 SLC13A4Q9UKG4 626 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TMCC3Q9ULS5 477 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 ABCG2Q9UNQ0 655 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 C19orf53Q9UNZ5 99 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 SATB2Q9UPW6 733 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 POFUT2Q9Y2G5 429 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 KLHL20Q9Y2M5 609 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 IFT52Q9Y366 437 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 HCN4Q9Y3Q4 1203 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 LYVE1Q9Y5Y7 322 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 GPC6Q9Y625 555 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 BRWD1Q9NSI6 2320 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CROCCQ5TZA2 2017 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 LOC105369274A0A096LPK9 316 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 LOC102723532A0A0G2JNH3 316 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 FITM1A5D6W6 292 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 WASHC1A8K0Z3 465 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 TMEM229AB2RXF0 380 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 C4orf51C9J302 202 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 H0YIG0 161 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZNF701M0R085 212 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 CLDN4O14493 209 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 BCKDKO14874 412 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 TOX3O15405 576 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 P2RX6O15547 441 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 COQ9O75208 318 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 PIAS2O75928 621 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 GADD45GO95257 159 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 NSA2O95478 260 aaKnown RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZBTB11O95625 1053 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 HMGN2P05204 90 aaKnown RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 TFAP2AP05549 437 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 FESP07332 822 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 SLC35E2P0CK97 266 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 OR12D1P0DN82 309 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 RNH1P13489 461 aaKnown RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 PNLIPP16233 465 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 GLB1P16278 677 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 CD247P20963 164 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 PRKAR1BP31321 381 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 GALNSP34059 522 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 HOXD12P35452 270 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 LSSP48449 732 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 RUNX2Q13950 521 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 GRM7Q14831 915 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 MICAQ29983 383 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZNF691Q5VV52 312 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 YOD1Q5VVQ6 348 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 AP1ARQ63HQ0 302 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 FRMPD2BQ6IN97 320 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 HEPHL1Q6MZM0 1159 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 RABEPKQ7Z6M1 372 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZNF605Q86T29 641 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 WDR5BQ86VZ2 330 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 PLXDC1Q8IUK5 500 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 OR4N4Q8N0Y3 316 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 FAM160A2Q8N612 972 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 DEFB123Q8N688 67 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 CDRT4Q8N9R6 151 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 TTC29Q8NA56 475 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 OR4C15Q8NGM1 316 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ADAMTS15Q8TE58 950 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 PHF10Q8WUB8 498 aaKnown RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 FBLIM1Q8WUP2 373 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 XAGE5Q8WWM1 108 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 PATE1Q8WXA2 126 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 KLHL6Q8WZ60 621 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 ZNF566Q969W8 418 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 MAGED4Q96JG8 741 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 DHRS1Q96LJ7 313 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 MUS81Q96NY9 551 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 COL21A1Q96P44 957 aa7.46□□□□□ -1.22
VMA21-203ENST00000477649 MYCBPQ99417 103 aaPredicted RBP7.46□□□□□ -1.22
VMA21-203ENST00000477649 PITX2Q99697 317 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms