RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SEC24DO94855 1032 aaPredicted RBP14.6□□□□□ -0.07
CPSF3-203ENST00000475482 B3GALT4O96024 378 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 S100A3P33764 101 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 LRRC74AQ0VAA2 488 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 EIF2S3LQ2VIR3 472 aaKnown RBP14.6□□□□□ -0.07
CPSF3-203ENST00000475482 VPS26BQ4G0F5 336 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 CCNYL2Q5T2Q4 361 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 OR4C11Q6IEV9 310 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 PGAM4Q8N0Y7 254 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 TMEM132CQ8N3T6 1108 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 VPS37AQ8NEZ2 397 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 OR2L5Q8NG80 312 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 GAL3ST3Q96A11 431 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 MTERF3Q96E29 417 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 F2RL3Q96RI0 385 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 HOPXQ9BPY8 73 aaPredicted RBP14.6□□□□□ -0.07
CPSF3-203ENST00000475482 MYNNQ9NPC7 610 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 ATAD3AQ9NVI7 634 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 BAIAP2L1Q9UHR4 511 aa14.6□□□□□ -0.07
CPSF3-203ENST00000475482 PRPF19Q9UMS4 504 aaKnown RBP14.6□□□□□ -0.07
CPSF3-203ENST00000475482 UTP20O75691 2785 aaKnown RBP14.59□□□□□ -0.07
CPSF3-203ENST00000475482 IGKV3D-11A0A0A0MRZ8 115 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 WIPF3A6NGB9 483 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 ANKRD65E5RJM6 399 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 SAP18O00422 153 aaKnown RBP14.59□□□□□ -0.07
CPSF3-203ENST00000475482 PGRP06401 933 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 KLK1P06870 262 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 CPOXP36551 454 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 PGM1P36871 562 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 SSR2P43308 183 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 MAPK12P53778 367 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 RAE1P78406 368 aaKnown RBP14.59□□□□□ -0.07
CPSF3-203ENST00000475482 HEPACAMQ14CZ8 416 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 NSDHLQ15738 373 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 EXT1Q16394 746 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 FAM174BQ3ZCQ3 159 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 TIGD2Q4W5G0 525 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 TOR1AIP1Q5JTV8 583 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 ZNF324BQ6AW86 544 aaPredicted RBP14.59□□□□□ -0.07
CPSF3-203ENST00000475482 QSOX2Q6ZRP7 698 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 GPR180Q86V85 440 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 DEFB107AQ8IZN7 70 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 KIF2BQ8N4N8 673 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 NATD1Q8N6N6 113 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 ST6GALNAC3Q8NDV1 305 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 CLHC1Q8NHS4 586 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 M1APQ8TC57 530 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 GRHL3Q8TE85 626 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 FAR1Q8WVX9 515 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 TSLPQ969D9 159 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 MS4A6EQ96DS6 147 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 TEX37Q96LM6 180 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 NPAS2Q99743 824 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 DDX31Q9H8H2 851 aaKnown RBP14.59□□□□□ -0.07
CPSF3-203ENST00000475482 COPS7BQ9H9Q2 264 aaPredicted RBP14.59□□□□□ -0.07
CPSF3-203ENST00000475482 WDR41Q9HAD4 459 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 MMP25Q9NPA2 562 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 AGPAT4Q9NRZ5 378 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 PLA2G3Q9NZ20 509 aa14.59□□□□□ -0.07
CPSF3-203ENST00000475482 C15orf38-AP3S2A0A0A6YYH1 394 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 TRAV17A0A0B4J275 112 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 ANKUB1A6NFN9 424 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 FBP2O00757 339 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 ERI3O43414 337 aaKnown RBP14.58□□□□□ -0.08
CPSF3-203ENST00000475482 CDC123O75794 336 aaPredicted RBP14.58□□□□□ -0.08
CPSF3-203ENST00000475482 WDPCPO95876 746 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 RNF224P0DH78 156 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 COX7A2P14406 83 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 CAPN3P20807 821 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 TACR1P25103 407 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 IL12AP29459 219 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 HNRNPH1P31943 449 aaKnown RBP14.58□□□□□ -0.08
CPSF3-203ENST00000475482 BSGP35613 385 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 KIR3DL1P43629 444 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 RAB8AP61006 207 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 OLR1P78380 273 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 ARG2P78540 354 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 SLC25A3Q00325 362 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 NFYCQ13952 458 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 INAQ16352 499 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 MAPKAPK3Q16644 382 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 BTBD16Q32M84 506 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 SFT2D3Q587I9 215 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 C6orf163Q5TEZ5 329 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 MFSD4BQ5TF39 518 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 PAPD4Q6PIY7 484 aaKnown RBP14.58□□□□□ -0.08
CPSF3-203ENST00000475482 ARPINQ7Z6K5 226 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 RIMKLAQ8IXN7 391 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 DPP10Q8N608 796 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 OR1N1Q8NGS0 311 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 CDC26Q8NHZ8 85 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 C16orf78Q8WTQ4 265 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 OR52E6Q96RD3 313 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 SLX1AQ9BQ83 275 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 THTPAQ9BU02 230 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 FAIM2Q9BWQ8 316 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 CADM1Q9BY67 442 aaKnown RBP14.58□□□□□ -0.08
CPSF3-203ENST00000475482 RBCK1Q9BYM8 510 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
CPSF3-203ENST00000475482 BLACEA4D250 179 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms