RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 SDC3O75056 442 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 RAB36O95755 333 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 AHRP35869 848 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 RPE65Q16518 533 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 BCL7AQ4VC05 210 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 IDNKQ5T6J7 187 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 METTL4Q8N3J2 472 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 OR4K5Q8NGD3 323 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 ADAD1Q96M93 576 aaKnown RBP13.1□□□□□ -0.31
BRAT1-203ENST00000467558 CPNE7Q9UBL6 633 aa13.1□□□□□ -0.31
BRAT1-203ENST00000467558 TACR1P25103 407 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 GPR143P51810 404 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 AP3S2P59780 193 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 PPP2R2BQ00005 443 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 CLCA4Q14CN2 919 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 BHLHA9Q7RTU4 235 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 VRK3Q8IV63 474 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 SLC5A8Q8N695 610 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF300Q96RE9 604 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-203ENST00000467558 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 ING3Q9NXR8 418 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 SLAMF8Q9P0V8 285 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF888P0CJ79 500 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-203ENST00000467558 GCGRP47871 477 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 SERTAD2Q14140 314 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 E2F2Q14209 437 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 RAB39AQ14964 217 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 RNF175Q8N4F7 328 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-203ENST00000467558 SCN1AP35498 2009 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 ITGA10O75578 1167 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 PSMB5P28074 263 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 CD6P30203 668 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 NRG4Q8WWG1 115 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 ISOC1Q96CN7 298 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 CHFRQ96EP1 664 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 ETAA1Q9NY74 926 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 GRHPRQ9UBQ7 328 aa13.09□□□□□ -0.31
BRAT1-203ENST00000467558 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 J3QLW9 94 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 CCRL2O00421 344 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 CLPXO76031 633 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 HMGN2P05204 90 aaKnown RBP13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF19P17023 458 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 DCKP27707 260 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.31
BRAT1-203ENST00000467558 TAS2R43P59537 309 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 GABARAPL2P60520 117 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF404Q494X3 552 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 SH2D5Q6ZV89 423 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF440Q8IYI8 595 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 DENND6BQ8NEG7 585 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 OR8J2Q8NGG1 315 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 OR2T11Q8NH01 316 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF675Q8TD23 568 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 DOK4Q8TEW6 326 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 C19orf43Q9BQ61 176 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 LGR4Q9BXB1 951 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 LIN28AQ9H9Z2 209 aaKnown RBP13.08□□□□□ -0.31
BRAT1-203ENST00000467558 POT1Q9NUX5 634 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 NKIRAS2Q9NYR9 191 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ADAM29Q9UKF5 820 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 SARDHQ9UL12 918 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 RARRES3Q9UL19 164 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.31
BRAT1-203ENST00000467558 ZNF670-ZNF695F2Z2N8 137 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ITIH1P19827 911 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 CTHP32929 405 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 MC3RP41968 323 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 CXCL12P48061 93 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-203ENST00000467558 GATSQ8NAP1 163 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 RLN3Q8WXF3 142 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 TANKQ92844 425 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 KIAA1217Q5T5P2 1943 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 SLC1A7O00341 560 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 MT-ND2P03891 347 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 MT-ND5P03915 603 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 PTNP21246 168 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 F8A1P23610 371 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 CD38P28907 300 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 RORAP35398 523 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 HK3P52790 923 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 MADCAM1Q13477 382 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 GK3PQ14409 553 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 TUBA3EQ6PEY2 450 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 AKAP14Q86UN6 197 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 PELI3Q8N2H9 469 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 PSD4Q8NDX1 1056 aa13.08□□□□□ -0.32
BRAT1-203ENST00000467558 OR51G2Q8NGK0 314 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms