RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 E7EQL1 145 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 B3GALT2O43825 422 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 IGKV3-11P04433 115 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 FCGR2AP12318 317 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 PEPDP12955 493 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 ZNF10P21506 573 aaPredicted RBP11.21□□□□□ -0.61
UBR4-210ENST00000466969 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBR4-210ENST00000466969 CCND1P24385 295 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 AHRP35869 848 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 SKIV2L2P42285 1042 aaKnown RBP11.21□□□□□ -0.61
UBR4-210ENST00000466969 KLF1Q13351 362 aaPredicted RBP11.21□□□□□ -0.61
UBR4-210ENST00000466969 MFSD7Q6UXD7 560 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 ERGIC2Q96RQ1 377 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 WWTR1Q9GZV5 400 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 FN3KRPQ9HA64 309 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 SLC2A6Q9UGQ3 507 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 EXO1Q9UQ84 846 aaKnown RBP11.21□□□□□ -0.61
UBR4-210ENST00000466969 GRIP1Q9Y3R0 1128 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 PPIAL4AQ9Y536 164 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 A0A0G2JN53 185 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 C4orf51C9J302 202 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 LDB3O75112 727 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 NIPSNAP2O75323 286 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 SNUPNO95149 360 aaKnown RBP11.2□□□□□ -0.62
UBR4-210ENST00000466969 RHOXF2BP0C7M4 288 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 SCTRP47872 440 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 SLC37A1P57057 533 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 CTSL3PQ5NE16 218 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 LCTLQ6UWM7 567 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 REC114Q7Z4M0 266 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 BPIFB2Q8N4F0 458 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 C7orf57Q8NEG2 295 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 ABHD11Q8NFV4 315 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 OR4K1Q8NGD4 311 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 MRAPQ8TCY5 172 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 DGAT2Q96PD7 388 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 CSF3RQ99062 836 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 SLC6A7Q99884 636 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 HAUS8Q9BT25 410 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 STMN4Q9H169 189 aaPredicted RBP11.2□□□□□ -0.62
UBR4-210ENST00000466969 LRRC40Q9H9A6 602 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 SNX15Q9NRS6 342 aa11.2□□□□□ -0.62
UBR4-210ENST00000466969 PDP1Q9P0J1 537 aaPredicted RBP11.2□□□□□ -0.62
UBR4-210ENST00000466969 NPIPA5A0A0B4J1W7 369 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 C2orf72A6NCS6 295 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 LGALS16A8MUM7 142 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 B4DSR2 109 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 NPIPA7E9PJI5 369 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 CYR61O00622 381 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 GAS8O95995 478 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 NPIPA8P0DM63 369 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SKILP12757 684 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 IL11P20809 199 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SRD5A2P31213 254 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 NRG3P56975 720 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 STXBP1P61764 594 aaKnown RBP11.19□□□□□ -0.62
UBR4-210ENST00000466969 P2RY6Q15077 328 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 TSC22D1Q15714 1073 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 TSTD2Q5T7W7 516 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 PPP4R4Q6NUP7 873 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SLC30A6Q6NXT4 461 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SLC22A25Q6T423 547 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 RNF111Q6ZNA4 994 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 ZBTB8AQ96BR9 441 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 NXNL1Q96CM4 212 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SNX18Q96RF0 628 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 USB1Q9BQ65 265 aaKnown RBP11.19□□□□□ -0.62
UBR4-210ENST00000466969 OSBPL11Q9BXB4 747 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 POTEKPQ9BYX7 375 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 PRRG4Q9BZD6 226 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SAP130Q9H0E3 1048 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 NTN4Q9HB63 628 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 SYBUQ9NX95 663 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 DDX56Q9NY93 547 aaKnown RBP11.19□□□□□ -0.62
UBR4-210ENST00000466969 XPR1Q9UBH6 696 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
UBR4-210ENST00000466969 E5RI56 91 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 H3BMM5 538 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 TIMM23O14925 209 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 CD3EAPO15446 510 aaKnown RBP11.18□□□□□ -0.62
UBR4-210ENST00000466969 PDE5AO76074 875 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 SERPINA6P08185 405 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 NPPBP16860 134 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 KRT15P19012 456 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 TCEA1P23193 301 aaKnown RBP11.18□□□□□ -0.62
UBR4-210ENST00000466969 MGAT1P26572 445 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 CDKN2BP42772 138 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 PHC1P78364 1004 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 ID2Q02363 134 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 NAE1Q13564 534 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 EBPQ15125 230 aaKnown RBP11.18□□□□□ -0.62
UBR4-210ENST00000466969 ZSWIM7Q19AV6 140 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 DPCR1Q3MIW9 517 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 ZNF544Q6NX49 715 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 CASC4Q6P4E1 433 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 GFM2Q969S9 779 aaKnown RBP11.18□□□□□ -0.62
UBR4-210ENST00000466969 GAL3ST3Q96A11 431 aa11.18□□□□□ -0.62
UBR4-210ENST00000466969 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
UBR4-210ENST00000466969 FBXL20Q96IG2 436 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms