RNA–Protein interactions for RNA: ENST00000465905.5

TRAPPC10-206, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-206ENST00000465905 FAIM2Q9BWQ8 316 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 OR10A5Q9H207 317 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 SLC24A3Q9HC58 644 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 MCCC2Q9HCC0 563 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 TRPS1Q9UHF7 1281 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 CFL2Q9Y281 166 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 PCDHA9Q9Y5H5 950 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
TRAPPC10-206ENST00000465905 NKX2-6A6NCS4 301 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 LRRC3CA6NJW4 275 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 CDH16O75309 829 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 TOXO94900 526 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 SNX4O95219 450 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 PDYNP01213 254 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 KRT6AP02538 564 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 KRT6BP04259 564 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 RFPL3SP0C7P2 107 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 GLI4P10075 376 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 CSNK2A2P19784 350 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 GDF1P27539 372 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 MSX1P28360 303 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 ZFP36L2P47974 494 aaKnown RBP11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 KRT6CP48668 564 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 MASP1P48740 699 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 TRA2BP62995 288 aaKnown RBP11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 CLCQ05315 142 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 RASA2Q15283 850 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 SLC48A1Q6P1K1 146 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 LETMD1Q6P1Q0 360 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 TMEM64Q6YI46 380 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 TIFABQ6ZNK6 161 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 TRMT10CQ7L0Y3 403 aaKnown RBP11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 CLYBLQ8N0X4 340 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 VWA5B2Q8N398 1253 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 ZNF615Q8N8J6 731 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 NEIL3Q8TAT5 605 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 SPPL2AQ8TCT8 520 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 PROK2Q9HC23 129 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 FARSBQ9NSD9 589 aaKnown RBP11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 TNFRSF10DQ9UBN6 386 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 PCDHGB3Q9Y5G1 929 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 FAM215AQ9Y5M1 114 aa11.75□□□□□ -0.53
TRAPPC10-206ENST00000465905 A0A1W2PS29 197 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 TRIM3O75382 744 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 ERAL1O75616 437 aaKnown RBP11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 SUPT7LO94864 414 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 LRATO95237 230 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 CT62P0C5K7 136 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 HSD3B1P14060 373 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 IGFBP2P18065 325 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 TSPAN8P19075 237 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 HSD3B2P26439 372 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 HSD17B3P37058 310 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 FBXW4P57775 412 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 TFF3Q07654 80 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 SLC25A35Q3KQZ1 300 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 RTL6Q6ICC9 239 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 RPS27LQ71UM5 84 aaKnown RBP11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 CEP112Q8N8E3 955 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 KIF18AQ8NI77 898 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 ADIPOR1Q96A54 375 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 SLC6A15Q9H2J7 730 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 SPRR3Q9UBC9 169 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 VPS29Q9UBQ0 182 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 BCAP29Q9UHQ4 241 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 NFU1Q9UMS0 254 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 STK38LQ9Y2H1 464 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 ZNF780BQ9Y6R6 833 aa11.74□□□□□ -0.53
TRAPPC10-206ENST00000465905 C15orf38-AP3S2A0A0A6YYH1 394 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 A0A1B0GTL3 188 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 CCDC151A5D8V7 595 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 PPP6CO00743 305 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ULK1O75385 1050 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 TRAPPC6AO75865 159 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 OR4F21O95013 312 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ESRRBO95718 433 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ATP1B1P05026 303 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 SBK3P0C264 359 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 NAGAP17050 411 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ENDOUP21128 410 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ATP5F1P24539 256 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 HMOX2P30519 316 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 FEN1P39748 380 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 TRPC1P48995 793 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ALDH9A1P49189 494 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 GALNT1Q10472 559 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 MAP4K2Q12851 820 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 CSTF3Q12996 717 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 SF3B4Q15427 424 aaKnown RBP eCLIP11.73□□□□□ -0.532e-7■■■■□ 20.4
TRAPPC10-206ENST00000465905 PRICKLE4Q2TBC4 344 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
TRAPPC10-206ENST00000465905 RIPPLY2Q5TAB7 128 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms