RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 APOBEC3BQ9UH17 382 aaKnown RBP17.64■□□□□ 0.42
TSPAN4-210ENST00000464987 ACAD8Q9UKU7 415 aa17.64■□□□□ 0.42
TSPAN4-210ENST00000464987 CA5BQ9Y2D0 317 aa17.64■□□□□ 0.42
TSPAN4-210ENST00000464987 H3BN98 237 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TLR4O00206 839 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 PLRG1O43660 514 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 AIFM1O95831 613 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TP53P04637 393 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 HMGN2P05204 90 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TEAD1P28347 426 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 RGS6P49758 472 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TARDBPQ13148 414 aaKnown RBP eCLIP17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 ITPRIPL2Q3MIP1 535 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TMEM196Q5HYL7 178 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TMEM107Q6UX40 140 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 CLIP4Q8N3C7 705 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 CHCHD6Q9BRQ6 235 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 PRR14Q9BWN1 585 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 IFT52Q9Y366 437 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 FANCMQ8IYD8 2048 aa17.64■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3DA0A087WVF3 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3IA0A087WXS9 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3EA0A087X179 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3KA0A087X1G2 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3FA6NER0 549 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 POM121BA6NF01 834 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 CCDC85CA6NKD9 419 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3LB9A6J9 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3HP0C7X1 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 ATP5A1P25705 553 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 BCAP31P51572 246 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 ADPRHP54922 357 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 CLDN2P57739 230 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 ILKQ13418 452 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 LRRC32Q14392 662 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 OXA1LQ15070 435 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3GQ6DHY5 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 MRM1Q6IN84 353 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3CQ6IPX1 549 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 MEX3DQ86XN8 651 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D3Q8IZP1 549 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 IQCF1Q8N6M8 205 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 OR6T1Q8NGN1 323 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 CLN6Q9NWW5 311 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 METTL15A6NJ78 407 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 SERPINB7O75635 380 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 RPLP0P05388 317 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 COL9A1P20849 921 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 AK4P27144 223 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 SLC15A1P46059 708 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 GSTM5P46439 218 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 LIMK1P53667 647 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 TRIM16LQ309B1 348 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 PODNL1Q6PEZ8 512 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 LINC00299Q6ZSB3 139 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 SLC6A18Q96N87 628 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 MROQ9BYG7 248 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 POLE4Q9NR33 117 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 MAN2C1Q9NTJ4 1040 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 EHD3Q9NZN3 535 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 ENOPH1Q9UHY7 261 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 PCDHGA3Q9Y5H0 932 aa17.63■□□□□ 0.41
TSPAN4-210ENST00000464987 H0Y8X5 98 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 FAAHO00519 579 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 NTSP30990 170 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 UGT2B10P36537 528 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 XKP51811 444 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 DNASE1L3Q13609 305 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 ZNF404Q494X3 552 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 TTLQ8NG68 377 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 OR4E2Q8NGC2 313 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 WDR36Q8NI36 951 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 ZG16BQ96DA0 208 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 GPA33Q99795 319 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 FAIM2Q9BWQ8 316 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 CDCA4Q9BXL8 241 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 POLR2J3Q9H1A7 115 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 SLC25A19Q9HC21 320 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 TBC1D29Q9UFV1 150 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 CLEC2DQ9UHP7 191 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 ZNF232Q9UNY5 417 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 MGAT4BQ9UQ53 548 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 TRBV23OR9-2A0A075B6M9 112 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 SH3D21A4FU49 640 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 UGT2B17O75795 530 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 NTN1O95631 604 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 DDX5P17844 614 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 TNNI3P19429 210 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 UGT2B15P54855 530 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 RAB15P59190 212 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 RPS3AP61247 264 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 SHHQ15465 462 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 TSTQ16762 297 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 TMEM35AQ53FP2 167 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 KCT2Q8NC54 265 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 OR2L5Q8NG80 312 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 CCL4L1Q8NHW4 92 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 PPP1R14BQ96C90 147 aa17.62■□□□□ 0.41
TSPAN4-210ENST00000464987 Q96MT0 163 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms