RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NECTIN3Q9NQS3 549 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 C6orf203Q9P0P8 240 aaPredicted RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 PCDHGB7Q9Y5F8 929 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 OR2W5A6NFC9 320 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ZNF701M0R085 212 aaPredicted RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 ITM2AO43736 263 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 PCDH7O60245 1069 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 DNAJA2O60884 412 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 DNAJB5O75953 348 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 MYO1DO94832 1006 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 AIFM1O95831 613 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ALPPP05187 535 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ITGA3P26006 1051 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 CPOXP36551 454 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 SLC1A6P48664 564 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 CCL11P51671 97 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 STX4Q12846 297 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 CCNIQ14094 377 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 TRIP10Q15642 601 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 VWA5B1Q5TIE3 1220 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ATG16L1Q676U5 607 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 PAPD4Q6PIY7 484 aaKnown RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 SCIMPQ6UWF3 145 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 HPS6Q86YV9 775 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 C9orf43Q8TAL5 461 aaPredicted RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 BORCS5Q969J3 196 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 APIPQ96GX9 242 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 IMMP1LQ96LU5 166 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 WDR77Q9BQA1 342 aaPredicted RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 MESP1Q9BRJ9 268 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 PELOQ9BRX2 385 aaKnown RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 SLC25A23Q9BV35 468 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 CCDC106Q9BWC9 280 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 FAIM2Q9BWQ8 316 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 LHPPQ9H008 270 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ILKAPQ9H0C8 392 aaPredicted RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 PALMDQ9NP74 551 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 ADAP2Q9NPF8 381 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 GPR83Q9NYM4 423 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 WBP11Q9Y2W2 641 aaKnown RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 FIS1Q9Y3D6 152 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 RAP2CQ9Y3L5 183 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 CCL27Q9Y4X3 112 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 CLDN16Q9Y5I7 305 aa10.37□□□□□ -0.75
APTX-209ENST00000460940 GPC6Q9Y625 555 aaPredicted RBP10.37□□□□□ -0.75
APTX-209ENST00000460940 A0A1W2PR48 441 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 SAGE2PA6NJ88 616 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TMEM233B4DJY2 109 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 SEC24DO94855 1032 aaPredicted RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 GBAP04062 536 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 ZNF23P17027 643 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 ALDH3B2P48448 385 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TMED10P49755 219 aaKnown RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 PGDP52209 483 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 IGLV3-21P80748 117 aaPredicted RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 MYBPC1Q00872 1141 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 BST1Q10588 318 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 ELAVL1Q15717 326 aaKnown RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 UGT3A2Q3SY77 523 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 NDUFAF5Q5TEU4 345 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 CES4AQ5XG92 561 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 C18orf63Q68DL7 685 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TCTN3Q6NUS6 607 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 PGM2L1Q6PCE3 622 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 DDIASQ8IXT1 998 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 FBXO27Q8NI29 283 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 M1APQ8TC57 530 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 AGR3Q8TD06 166 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 EME1Q96AY2 570 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 CLPTM1LQ96KA5 538 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 C7orf26Q96N11 449 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TUBB1Q9H4B7 451 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 LRTM1Q9HBL6 345 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 THAP1Q9NVV9 213 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 C1orf109Q9NX04 203 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TEX10Q9NXF1 929 aaPredicted RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 ZDHHC2Q9UIJ5 367 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 GNG14A0A1W2PPG7 69 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 C1orf226A1L170 272 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 PIP5K1BO14986 540 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 LSM1O15116 133 aaKnown RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 LYPLA1O75608 230 aaPredicted RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 PRR35P0CG20 571 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 COX7A2P14406 83 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 CPA2P48052 419 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 RPS3AP61247 264 aaKnown RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 RAE1P78406 368 aaKnown RBP10.36□□□□□ -0.75
APTX-209ENST00000460940 PLIN5Q00G26 463 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 ZNF763Q0D2J5 394 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 Q0VFX4 171 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 NR6A1Q15406 480 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 XKR7Q5GH72 579 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 TMEM132CQ8N3T6 1108 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 EXD3Q8N9H8 876 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 FDCSPQ8NFU4 85 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 OR14A16Q8NHC5 309 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 PYDC1Q8WXC3 89 aa10.36□□□□□ -0.75
APTX-209ENST00000460940 ANKRD9Q96BM1 317 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms