RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 STT3AP46977 705 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 SERPINB4P48594 390 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 TRA2BP62995 288 aaKnown RBP11.54□□□□□ -0.56
SSR4-205ENST00000447375 HSF1Q00613 529 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 HMGCS1Q01581 520 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 ID2Q02363 134 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 SPIN4Q56A73 249 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 ACER2Q5QJU3 275 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 GALNT18Q6P9A2 607 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 SCIMPQ6UWF3 145 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 RNF165Q6ZSG1 346 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 NUDCD3Q8IVD9 361 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 OR4N5Q8IXE1 308 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 LGI4Q8N135 537 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 ARMC10Q8N2F6 343 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 GHDCQ8N2G8 530 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 KIF2BQ8N4N8 673 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 MORN4Q8NDC4 146 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 WFDC11Q8NEX6 87 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 UCN3Q969E3 161 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 TM4SF18Q96CE8 201 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 ZNF354BQ96LW1 612 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 WDR41Q9HAD4 459 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 EML4Q9HC35 981 aaKnown RBP11.54□□□□□ -0.56
SSR4-205ENST00000447375 TEX10Q9NXF1 929 aaPredicted RBP11.54□□□□□ -0.56
SSR4-205ENST00000447375 CCL27Q9Y4X3 112 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 CLCA3PQ9Y6N3 262 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 EML6Q6ZMW3 1958 aa11.54□□□□□ -0.56
SSR4-205ENST00000447375 NPIPB8E9PQR5 432 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 CTAG2O75638 210 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 CHRNGP07510 517 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 ARRB2P32121 409 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 CLCN2P51788 898 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 TAS2R50P59544 299 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 RAE1P78406 368 aaKnown RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 ACSM2AQ08AH3 577 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 MEP1AQ16819 746 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 UGT3A2Q3SY77 523 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 NDUFAF5Q5TEU4 345 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 ACSM2BQ68CK6 577 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 CLEC6AQ6EIG7 209 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 OR52E8Q6IFG1 317 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 ZCCHC23Q6ZST2 131 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 RPS19BP1Q86WX3 136 aaKnown RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 CRLF3Q8IUI8 442 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 CLYBLQ8N0X4 340 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 SLC5A8Q8N695 610 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 OR14A16Q8NHC5 309 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 DAZLQ92904 295 aaKnown RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 TLCD1Q96CP7 247 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 RMND5BQ96G75 393 aaPredicted RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 APIPQ96GX9 242 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 RBM18Q96H35 190 aaKnown RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 METTL2AQ96IZ6 378 aaKnown RBP11.53□□□□□ -0.56
SSR4-205ENST00000447375 NPAS2Q99743 824 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 TMBIM4Q9HC24 238 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 KCNK9Q9NPC2 374 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 KLHL1Q9NR64 748 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 MCM8Q9UJA3 840 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 CES1P1Q9UKY3 287 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 TRAF6Q9Y4K3 522 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 PCDHA9Q9Y5H5 950 aa11.53□□□□□ -0.56
SSR4-205ENST00000447375 C1orf226A1L170 272 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 GOLGA6L10A6NI86 522 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 SLC28A1O00337 649 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 RSL1D1O76021 490 aaKnown RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 SLC35E2P0CK97 266 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 ALOX15P16050 662 aaPredicted RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 H2AFXP16104 143 aaPredicted RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 TNNI3P19429 210 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 PRPH2P23942 346 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 CHRNB4P30926 498 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 TIA1P31483 386 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSR4-205ENST00000447375 GALNSP34059 522 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 SLC18A1P54219 525 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 SPDYAQ5MJ70 313 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 KANK2Q63ZY3 851 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 FCRLBQ6BAA4 426 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 SLC48A1Q6P1K1 146 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 CAMKMTQ7Z624 323 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 SIAH3Q8IW03 269 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 CHERPQ8IWX8 916 aaKnown RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 OR4K14Q8NGD5 310 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 NCLNQ969V3 563 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 MBD6Q96DN6 1003 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 VMP1Q96GC9 406 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 SENP5Q96HI0 755 aaPredicted RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 PKNOX2Q96KN3 472 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 DGAT2Q96PD7 388 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 PELOQ9BRX2 385 aaKnown RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 TUBB1Q9H4B7 451 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 CDCP1Q9H5V8 836 aa11.52□□□□□ -0.57
SSR4-205ENST00000447375 ZNF223Q9UK11 482 aaPredicted RBP11.52□□□□□ -0.57
SSR4-205ENST00000447375 DNAJC15Q9Y5T4 150 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms