RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PRKAR1AP10644 381 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 ICAM2P13598 275 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF823P16415 610 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 PGCP20142 388 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 BCKDHBP21953 392 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 BLVRAP53004 296 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 RRADP55042 308 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 SPATS1Q496A3 300 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 OAFQ86UD1 273 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 LGI4Q8N135 537 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 RNF175Q8N4F7 328 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 CBR4Q8N4T8 237 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 OR52P1PQ8NH57 321 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF749O43361 778 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 RENP00797 406 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 NR2C1P13056 603 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 CAPZBP47756 277 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 OGFOD2Q6N063 350 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 METTL4Q8N3J2 472 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 LINC00471Q8N535 108 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 L3MBTL4Q8NA19 623 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 OR5K1Q8NHB7 308 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 PYURFQ96I23 114 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 HOXD1Q9GZZ0 328 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 NLGN3Q9NZ94 848 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 IRGMA1A4Y4 181 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 ANTXRLA6NF34 631 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 GFYI3L273 518 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 ZFAND5O76080 213 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 CD160O95971 181 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 RPS9P46781 194 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 KCTD21Q4G0X4 260 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 LAIR1Q6GTX8 287 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 CANT1Q8WVQ1 401 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 SDR39U1Q9NRG7 319 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 RASSF1Q9NS23 344 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 GALNT8Q9NY28 637 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 LYNP07948 512 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 CKMT2P17540 419 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 S100A1P23297 94 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 OR2T5Q6IEZ7 315 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 OR2T29Q8NH02 315 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 TCEAL2Q9H3H9 227 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 MKLN1Q9UL63 735 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 HCN1O60741 890 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 ST13P50502 369 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 PFN3P60673 137 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 FZD2Q14332 565 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 ARMC4Q5T2S8 1044 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 BMP8AQ7Z5Y6 402 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 OR10Q1Q8NGQ4 319 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 MS4A8Q9BY19 250 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 RACGAP1Q9H0H5 632 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 EBF2Q9HAK2 575 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 THSD1Q9NS62 852 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 SPHK1Q9NYA1 384 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 FBXO4Q9UKT5 387 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 A0A1B0GX78 115 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 BCKDKO14874 412 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 NOBOXO60393 691 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 NXPH1P58417 271 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 PCDH1Q08174 1060 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 OR52N2Q8NGI0 321 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 TRIM2Q9C040 744 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 WASH6PQ9NQA3 447 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 RAB26Q9ULW5 256 aa13.34□□□□□ -0.27
SMARCA4-204ENST00000444061 GPR3P46089 330 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 LPCAT4Q643R3 524 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 RNFT2Q96EX2 444 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 SORT1Q99523 831 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 COQ7Q99807 217 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 C1orf21Q9H246 121 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 CLK4Q9HAZ1 481 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 SMPD3Q9NY59 655 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 PTTG2Q9NZH5 202 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 ICKQ9UPZ9 632 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 RCBTB2O95199 551 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 GSTM3P21266 225 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 SDHBP21912 280 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 FCARP24071 287 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 DGCR6Q14129 220 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 UGT3A2Q3SY77 523 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 TREML1Q86YW5 311 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 ZNF440Q8IYI8 595 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 OR6N1Q8NGY5 312 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 WDR83Q9BRX9 315 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 OR51V1Q9H2C8 321 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 SMOC1Q9H4F8 434 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 AP4B1Q9Y6B7 739 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 NPIPA5E9PKD4 350 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 CPMP14384 443 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 LTBRP36941 435 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 ITGADQ13349 1161 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 TRAM2Q15035 370 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM207Q6UWW9 146 aa13.33□□□□□ -0.28
SMARCA4-204ENST00000444061 PNPLA2Q96AD5 504 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms