RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OR8J2Q8NGG1 315 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SEC14L3Q9UDX4 400 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 BTNL2Q9UIR0 455 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MED16Q9Y2X0 877 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PRKAB1Q9Y478 270 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 INSIG1O15503 277 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SEC14L5O43304 696 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CDC123O75794 336 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 GRK4P32298 578 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 DLX5P56178 289 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 MTFR2Q6P444 385 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 BCDIN3DQ7Z5W3 292 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 GPR135Q8IZ08 494 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 PGBD5Q8N414 524 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 APIPQ96GX9 242 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 NUP98P52948 1817 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 MID1O15344 667 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 MT-ND5P03915 603 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 MMP2P08253 660 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 CDH11P55287 796 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 RAB8AP61006 207 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 RAB5BP61020 215 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 GPR17Q13304 367 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SMCO1Q147U7 214 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 AKIRIN2Q53H80 203 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 RAB41Q5JT25 222 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 ALKAL2Q6UX46 152 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 PAQR9Q6ZVX9 377 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 OR4C15Q8NGM1 316 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SLC16A10Q8TF71 515 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 ELP4Q96EB1 424 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 ARRDC5A6NEK1 342 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SCAMP2O15127 329 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 TACR1P25103 407 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 HLA-FP30511 346 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 RPL3P39023 403 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 BDKRB1P46663 353 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SEC61A1P61619 476 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 SLC5A12Q1EHB4 618 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 UPF1Q92900 1129 aaKnown RBP eCLIP4.77□□□□□ -1.65
HERC1-201ENST00000443617 BTBD1Q9H0C5 482 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 TEX10Q9NXF1 929 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CASTOR2A6NHX0 329 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 LCMT2O60294 686 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 CSKP41240 450 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 QSOX2Q6ZRP7 698 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 BTN2A1Q7KYR7 527 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 LIMS2Q7Z4I7 341 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 DDX53Q86TM3 631 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 ARRDC2Q8TBH0 407 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 TREX2Q9BQ50 279 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 TAPBPLQ9BX59 468 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 TMEM248Q9NWD8 314 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 RUVBL1Q9Y265 456 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 TAPBPO15533 448 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 PRODHO43272 600 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CD3GP09693 182 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CD9P21926 228 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SOX4Q06945 474 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 PABPC1L2AQ5JQF8 200 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 AVPI1Q5T686 147 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 OR2G6Q5TZ20 316 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 KIAA1324Q6UXG2 1013 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 LHFPL3Q86UP9 236 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 OR11H4Q8NGC9 324 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 FBXO32Q969P5 355 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 C7orf50Q9BRJ6 194 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 C1QTNF6Q9BXI9 259 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CXCL16Q9H2A7 254 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SGK2Q9HBY8 427 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SYN3O14994 580 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CBSLP0DN79 551 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 CBSP35520 551 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SRP9P49458 86 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 RPS26P62854 115 aaKnown RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 RAB40BQ12829 278 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 TEX26Q8N6G2 289 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 INO80EQ8NBZ0 244 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 OR52I1Q8NGK6 324 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SCARB1Q8WTV0 552 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 ZFP42Q96MM3 310 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 A8MXK9 166 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 PRAF2O60831 178 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SYPP08247 313 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 HAPLN1P10915 354 aaPredicted RBP4.77□□□□□ -1.65
HERC1-201ENST00000443617 RFX3P48380 749 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 ELP2Q6IA86 826 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 PTOV1Q86YD1 416 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 TMEM185AQ8NFB2 350 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 SIGLEC11Q96RL6 698 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 OSGEPL1Q9H4B0 414 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 LDAHQ9H6V9 325 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 TRIM36Q9NQ86 728 aa4.77□□□□□ -1.65
HERC1-201ENST00000443617 NANSQ9NR45 359 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms