RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RANGRFQ9HD47 186 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TM7SF3Q9NS93 570 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SIRT3Q9NTG7 399 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ELOVL2Q9NXB9 296 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CLDND1Q9NY35 253 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 EIF3KQ9UBQ5 218 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PHF11Q9UIL8 331 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF490Q9ULM2 529 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 DYRK1BQ9Y463 629 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CLDN16Q9Y5I7 305 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MIA3Q5JRA6 1907 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 DSPPQ9NZW4 1301 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 LOC100506127A0A0U1RQW1 187 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 HYKKA2RU49 373 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CCDC182A6NF36 153 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 ZAR1LA6NP61 321 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 H3BNC9 293 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 hCG_2039718K7EN88 272 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 PDE9AO76083 593 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 F11P03951 625 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 THBS1P07996 1170 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 ITGB6P18564 788 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 SDC1P18827 310 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CSTF2P33240 577 aaKnown RBP eCLIP7.65□□□□□ -1.182e-7■■■■□ 24.5
VTI1A-202ENST00000432306 HTR2BP41595 481 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CRYBB2P43320 205 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 KIR3DL1P43629 444 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 PGFP49763 221 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 RGS4P49798 205 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 RAB25P57735 213 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 SNRPGP62308 76 aaKnown RBP7.65□□□□□ -1.18
VTI1A-202ENST00000432306 HMGCS1Q01581 520 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 GPM6BQ13491 265 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 MICAQ29983 383 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 TCEAL5Q5H9L2 206 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 KLHL24Q6TFL4 600 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CD300LGQ6UXG3 332 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 FAM92BQ6ZTR7 304 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 VTCN1Q7Z7D3 282 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 MRPL10Q7Z7H8 261 aaKnown RBP7.65□□□□□ -1.18
VTI1A-202ENST00000432306 SCN4BQ8IWT1 228 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CADM2Q8N3J6 435 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 ARL14Q8N4G2 192 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 MRPL43Q8N983 215 aaKnown RBP7.65□□□□□ -1.18
VTI1A-202ENST00000432306 L3MBTL4Q8NA19 623 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 FIBINQ8TAL6 211 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 IGSF8Q969P0 613 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 SLC25A46Q96AG3 418 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 AP2M1Q96CW1 435 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 RNF125Q96EQ8 232 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 FYTTD1Q96QD9 318 aaKnown RBP7.65□□□□□ -1.18
VTI1A-202ENST00000432306 HBEGFQ99075 208 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 FEVQ99581 238 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CCM2Q9BSQ5 444 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CNTNAP3Q9BZ76 1288 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 FAM83DQ9H4H8 585 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 NRIP3Q9NQ35 241 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 FAM86C1Q9NVL1 165 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 NDUFB11Q9NX14 153 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 GPR83Q9NYM4 423 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 PTTG3PQ9NZH4 202 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 NDUFAF4Q9P032 175 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 PRELID1Q9Y255 219 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 DLGAP4Q9Y2H0 992 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 HIF3AQ9Y2N7 669 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 CMAHPQ9Y471 501 aa7.65□□□□□ -1.18
VTI1A-202ENST00000432306 COL4A6Q14031 1691 aa7.65□□□□□ -1.19
VTI1A-202ENST00000432306 ZFHX2Q9C0A1 2572 aaPredicted RBP7.65□□□□□ -1.19
VTI1A-202ENST00000432306 PLXNA3P51805 1871 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 TRBV5-4A0A0C4DH59 114 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 A0A1W2PQ67 120 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 C1orf226A1L170 272 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 ZSCAN5BA6NJL1 495 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 MAGEB17A8MXT2 336 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 E5RI56 91 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 M0R296 226 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 PLA2G10O15496 165 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 INSIG1O15503 277 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 ARHGEF9O43307 516 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 SUV39H1O43463 412 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 OR1I1O60431 355 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 CLDN9O95484 217 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 VIPP01282 170 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 ITGA5P08648 1049 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 CSF3P09919 207 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 JUPP14923 745 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 ENGP17813 658 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 EPORP19235 508 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 DGKAP23743 735 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 PSMA1P25786 263 aaKnown RBP7.64□□□□□ -1.19
VTI1A-202ENST00000432306 ABCD3P28288 659 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 RPS19P39019 145 aaKnown RBP7.64□□□□□ -1.19
VTI1A-202ENST00000432306 LUMP51884 338 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-202ENST00000432306 GFRA1P56159 465 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 CDC42P60953 191 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 SELENOWP63302 87 aa7.64□□□□□ -1.19
VTI1A-202ENST00000432306 HTRA4P83105 476 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-202ENST00000432306 CYP4F8P98187 520 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms