RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 SPNS3Q6ZMD2 512 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 RDH11Q8TC12 318 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 ZNF597Q96LX8 424 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 BRINP2Q9C0B6 783 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 OR10A5Q9H207 317 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 WDR41Q9HAD4 459 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 ZDHHC18Q9NUE0 388 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 CNIH4Q9P003 139 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 NPFFR2Q9Y5X5 522 aa13.06□□□□□ -0.32
SMARCE1-205ENST00000431889 NF1P21359 2839 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 TRIM3O75382 744 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 ERAL1O75616 437 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 SLC35E2P0CK97 266 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 KIR2DL3P43628 341 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 SERPINB8P50452 374 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 CUL3Q13618 768 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 CEBPEQ15744 281 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 TCHHL1Q5QJ38 904 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 OR52E8Q6IFG1 317 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 KLC3Q6P597 504 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 YRDCQ86U90 279 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 GALNT12Q8IXK2 581 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 TAGAPQ8N103 731 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 SLC15A4Q8N697 577 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 ZNF615Q8N8J6 731 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 ZNF441Q8N8Z8 693 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 L3MBTL4Q8NA19 623 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 OR4F6Q8NGB9 312 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 ADIPOR1Q96A54 375 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 REPS1Q96D71 796 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 TRIB1Q96RU8 372 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 TIMP4Q99727 224 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 XPR1Q9UBH6 696 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 BCAP29Q9UHQ4 241 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 SLC12A4Q9UP95 1085 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 PLEKHA6Q9Y2H5 1048 aa13.05□□□□□ -0.32
SMARCE1-205ENST00000431889 POC1B-GALNT4F8VUJ3 575 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 SOX18P35713 384 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 CRYZQ08257 329 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 NAB1Q13506 487 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 ACSF3Q4G176 576 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 C8orf74Q6P047 294 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 OR4K14Q8NGD5 310 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 SPPL2AQ8TCT8 520 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 ANP32BQ92688 251 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 B4GALT7Q9UBV7 327 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 PCTPQ9UKL6 214 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 ITPR3Q14573 2671 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 MPDZO75970 2070 aa13.04□□□□□ -0.32
SMARCE1-205ENST00000431889 C17orf51A8MQB3 221 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 FOXE1O00358 373 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 CTAG2O75638 210 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 KRT38O76015 456 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 PDYNP01213 254 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 GABRA1P14867 456 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 CNTFP26441 200 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ABCD3P28288 659 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 CASP3P42574 277 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ALDH9A1P49189 494 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ZNF136P52737 540 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 TRAF3Q13114 568 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 TEX35Q5T0J7 233 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 FRG2Q64ET8 278 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 LINC01560Q8TB33 94 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 FRG2BQ96QU4 278 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 NODALQ96S42 347 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 SERPINI1Q99574 410 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 PELOQ9BRX2 385 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ITPAQ9BY32 194 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 CLEC4MQ9H2X3 399 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ACKR4Q9NPB9 350 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 MAPRE3Q9UPY8 281 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 OR6C76A6NM76 312 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 TP53I11O14683 189 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 CPMP14384 443 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 CHN1P15882 459 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 BMP7P18075 431 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 S1PR1P21453 382 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 GPX3P22352 226 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 TACR1P25103 407 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 MAPK12P53778 367 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 SRYQ05066 204 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 IFT88Q13099 833 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 LETMD1Q6P1Q0 360 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 POMZP3Q6PJE2 187 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 ANGPTL8Q6UXH0 198 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 COMMD6Q7Z4G1 85 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
SMARCE1-205ENST00000431889 IFT81Q8WYA0 676 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms