RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SLC11A1P49279 550 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ZNF131P52739 623 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 NLRP11P59045 1033 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CETN1Q12798 172 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ELAVL2Q12926 359 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 TRAF3Q13114 568 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 TRA2AQ13595 282 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 KIR2DS3Q14952 304 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 PDK1Q15118 436 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CCDC6Q16204 474 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ACKR1Q16570 336 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 IMMTQ16891 758 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 PDLIM3Q53GG5 364 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 RHBDF2Q6PJF5 856 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 C19orf48Q6RUI8 117 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CD164L2Q6UWJ8 174 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CCBE1Q6UXH8 406 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 B3GLCTQ6Y288 498 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 IL17RELQ6ZVW7 336 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 BTN2A1Q7KYR7 527 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ERICH1Q86X53 443 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SFR1Q86XK3 245 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 AQP12AQ8IXF9 295 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 MMD2Q8IY49 270 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 NRACQ8N912 160 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CDKL2Q92772 493 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 AZIN2Q96A70 460 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SLCO4A1Q96BD0 722 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 PYCR2Q96C36 320 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 C14orf79Q96F83 325 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 HMCESQ96FZ2 354 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 FAM20AQ96MK3 541 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CCT7Q99832 543 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SCAND2PQ9GZW5 306 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SDCBP2Q9H190 292 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 CLMPQ9H6B4 373 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ZDHHC6Q9H6R6 413 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 APOBEC3GQ9HC16 384 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SYTL2Q9HCH5 934 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 POLE3Q9NRF9 147 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 FGF21Q9NSA1 209 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 KCNN3Q9UGI6 736 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 UBQLN2Q9UHD9 624 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 XPO7Q9UIA9 1087 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 NOCTQ9UK39 431 aaKnown RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 SATB2Q9UPW6 733 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 PRG3Q9Y2Y8 225 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-203ENST00000430118 KLK4Q9Y5K2 254 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 ZFYVE26Q68DK2 2539 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 MAST4O15021 2626 aa3.73□□□□□ -1.81
HMGB3-203ENST00000430118 NEDD4P46934 1319 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 FLNBO75369 2602 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 A0A087X0K7 114 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 A0A0G2JPF8 293 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 C5orf51A6NDU8 294 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 C2orf81A6NN90 581 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 USP27XA6NNY8 438 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 HNRNPCL3B7ZW38 293 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 GOLGA8KD6RF30 607 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 H0YC42 278 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 CCL16O15467 120 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 NOL3O60936 208 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 KRT33AO76009 404 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ATP6V1G2O95670 118 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 FGFR1OPO95684 399 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 FSHBP01225 129 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 SLC4A1P02730 911 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 SLPIP03973 132 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 KRT19P08727 400 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 SBK2P0C263 348 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 HNRNPCL4P0DMR1 293 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ACP2P11117 423 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 EPB41P11171 864 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 FCGR1AP12314 374 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 HLA-DOBP13765 273 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 PLA2G2AP14555 144 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 AREGP15514 252 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ITGA2P17301 1181 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 CD9P21926 228 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 FBLP22087 321 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ACP1P24666 158 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 GDI1P31150 447 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ARRB2P32121 409 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ACADSBP45954 432 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 OR3A1P47881 315 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 PCYT1AP49585 367 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 THOP1P52888 689 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 MAZP56270 477 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 GMFBP60983 142 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 HAND2P61296 217 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 ISL1P61371 349 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 RELQ04864 619 aaPredicted RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 GFPT1Q06210 699 aaPredicted RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 SRSF5Q13243 272 aaKnown RBP3.72□□□□□ -1.81
HMGB3-203ENST00000430118 PDE7AQ13946 482 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 CASP8Q14790 479 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 TAF13Q15543 124 aa3.72□□□□□ -1.81
HMGB3-203ENST00000430118 MAPK6Q16659 721 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms