RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 A0A0A6YYD5 115 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 NPHS1O60500 1241 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 LDB3O75112 727 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 FAM58BPP0C7Q3 252 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 DHRS4L1P0CG22 281 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 TPP2P29144 1249 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 OR4D2P58180 307 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 GALNT1Q10472 559 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 TBL3Q12788 808 aaKnown RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 ASPHQ12797 758 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 RCN2Q14257 317 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 CMPK2Q5EBM0 449 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 AGBL2Q5U5Z8 902 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 HHATQ5VTY9 493 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 CYP20A1Q6UW02 462 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 COMMD6Q7Z4G1 85 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 METTL4Q8N3J2 472 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 HORMAD2Q8N7B1 307 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 PLPP5Q8NEB5 264 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 SREK1Q8WXA9 508 aaKnown RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 RMND5BQ96G75 393 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 APIPQ96GX9 242 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 ROGDIQ9GZN7 287 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 STMN4Q9H169 189 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 CLEC4MQ9H2X3 399 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 TP63Q9H3D4 680 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 CDCP1Q9H5V8 836 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 ZNF446Q9NWS9 450 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 PSD3Q9NYI0 1048 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 C19orf25Q9UFG5 118 aaPredicted RBP16.64■□□□□ 0.25
VCP-202ENST00000417448 STK38LQ9Y2H1 464 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 ASB4Q9Y574 426 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 TLN2Q9Y4G6 2542 aa16.64■□□□□ 0.25
VCP-202ENST00000417448 A0A1W2PR48 441 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 TFECO14948 347 aaPredicted RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 AZIN1O14977 448 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 TM9SF1O15321 606 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 HS6ST1O60243 411 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 CDC40O60508 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
VCP-202ENST00000417448 SCELO95171 688 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 NEFHP12036 1026 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 JAK1P23458 1154 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 ACTN3Q08043 901 aaPredicted RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 SLC13A2Q13183 592 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 SNTB1Q13884 538 aaKnown RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 EXT1Q16394 746 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 SPDYAQ5MJ70 313 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 CCNYL2Q5T2Q4 361 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 GPR180Q86V85 440 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 CLYBLQ8N0X4 340 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 SLC5A8Q8N695 610 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 OR6Y1Q8NGX8 325 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 C18orf12Q96KH6 178 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 C20orf27Q9GZN8 174 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 TUBB1Q9H4B7 451 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 DDX31Q9H8H2 851 aaKnown RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 CLK4Q9HAZ1 481 aaKnown RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 SLC24A3Q9HC58 644 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 PNO1Q9NRX1 252 aaKnown RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 RASSF1Q9NS23 344 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 TEX10Q9NXF1 929 aaPredicted RBP16.63■□□□□ 0.25
VCP-202ENST00000417448 VPS29Q9UBQ0 182 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 ZDHHC2Q9UIJ5 367 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 CLDN16Q9Y5I7 305 aa16.63■□□□□ 0.25
VCP-202ENST00000417448 A0A1W2PS29 197 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 PGRMC2O15173 223 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 CYC1P08574 325 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 LINC00032P0C843 101 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 UROSP10746 265 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 IL10P22301 178 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 DGKQP52824 942 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 RAE1P78406 368 aaKnown RBP16.62■□□□□ 0.25
VCP-202ENST00000417448 SH2D4BQ5SQS7 431 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 MRM1Q6IN84 353 aaKnown RBP16.62■□□□□ 0.25
VCP-202ENST00000417448 PAPD4Q6PIY7 484 aaKnown RBP16.62■□□□□ 0.25
VCP-202ENST00000417448 CLEC9AQ6UXN8 241 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 LGI4Q8N135 537 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 KIF2BQ8N4N8 673 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 MBD6Q96DN6 1003 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 ATP6V1G3Q96LB4 118 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 EBPLQ9BY08 206 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 BRF2Q9HAW0 419 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 PRDM9Q9NQV7 894 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 PLSCR2Q9NRY7 297 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 GIMAP2Q9UG22 337 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 TRAF6Q9Y4K3 522 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 ZANQ9Y493 2812 aa16.62■□□□□ 0.25
VCP-202ENST00000417448 IGKV3D-11A0A0A0MRZ8 115 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 BIRC5O15392 142 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 SEMA3DO95025 777 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 INHBBP09529 407 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 CSTF3Q12996 717 aaKnown RBP16.61■□□□□ 0.25
VCP-202ENST00000417448 CDC20BQ86Y33 519 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 KRTAP1-3Q8IUG1 177 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 ZCCHC7Q8N3Z6 543 aaKnown RBP16.61■□□□□ 0.25
VCP-202ENST00000417448 OR2T11Q8NH01 316 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms