RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 OR10H2O60403 315 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 AIFM1O95831 613 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 CT62P0C5K7 136 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 MTHFD2P13995 350 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 CPN1P15169 458 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 STMN1P16949 149 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 ADSLP30566 484 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 TLX1P31314 330 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 RPL21P46778 160 aaKnown RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 DR1Q01658 176 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 WIPI1Q5MNZ9 446 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 FBXW10Q5XX13 1052 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 CYS1Q717R9 158 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 PACS2Q86VP3 889 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 STAG3L4Q8TBR4 150 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 MTERF1Q99551 399 aaKnown RBP11.09□□□□□ -0.63
LIMS2-210ENST00000413578 CPNE1Q99829 537 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 YIPF4Q9BSR8 244 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 G6PC3Q9BUM1 346 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 ALG9Q9H6U8 611 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 GALNT8Q9NY28 637 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 RNF112Q9ULX5 631 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 FAM159BA6NKW6 160 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 KERAO60938 352 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 RCBTB2O95199 551 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 LY6G6DO95868 133 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 ACTL6AO96019 429 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 ABCB1P08183 1280 aaPredicted RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 FAM58BPP0C7Q3 252 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 TMIGD3P0DMS9 266 aaPredicted RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 NR2F6P10588 404 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 S1PR1P21453 382 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 GP5P40197 560 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 PTGDSP41222 190 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 MASP1P48740 699 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 TMED10P49755 219 aaKnown RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 RAP1GDS1P52306 607 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 RAB10P61026 200 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 RPS13P62277 151 aaKnown RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 CUL3Q13618 768 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 DDX39BQ13838 428 aaKnown RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 POU4F3Q15319 338 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 GALNT12Q8IXK2 581 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 ZBED8Q8IZ13 594 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 LRRC75A-AS1Q8N1F1 130 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 FAM83FQ8NEG4 500 aaPredicted RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 EXT2Q93063 718 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 ISL2Q96A47 359 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 MDFIQ99750 246 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 PIP5K1AQ99755 562 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 TUBA1CQ9BQE3 449 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 CENPKQ9BS16 269 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 RBM24Q9BX46 236 aaKnown RBP11.08□□□□□ -0.64
LIMS2-210ENST00000413578 PSD3Q9NYI0 1048 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 OPTCQ9UBM4 332 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 NINQ8N4C6 2090 aa11.08□□□□□ -0.64
LIMS2-210ENST00000413578 TCRBV9S1A1TA0A576 114 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 SH3D21A4FU49 640 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 FAM171A2A8MVW0 826 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 KIAA1324LA8MWY0 1029 aaPredicted RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 H0YIV9 168 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 UBXN8O00124 270 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 SNPHO15079 494 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 PGRMC2O15173 223 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 SIAH2O43255 324 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 CDH16O75309 829 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 S100BP04271 92 aaPredicted RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 EPB42P16452 691 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 NAGAP17050 411 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 GPX3P22352 226 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 PTX3P26022 381 aaPredicted RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 ABCD3P28288 659 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 SSTR1P30872 391 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 LIPJQ5W064 366 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 OR52E8Q6IFG1 317 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 CREG2Q8IUH2 290 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 KLHL7Q8IXQ5 586 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 PRR22Q8IZ63 422 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 WDR20Q8TBZ3 569 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 SLC44A1Q8WWI5 657 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 HGDQ93099 445 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 CTHRC1Q96CG8 243 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 ZFP3Q96NJ6 502 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 OR2B2Q9GZK3 357 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 OR10A5Q9H207 317 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 CLCF1Q9UBD9 225 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 DTX4Q9Y2E6 619 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 TESMINQ9Y4I5 508 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 PCDHGA11Q9Y5H2 935 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 ATRQ13535 2644 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 ANK3Q12955 4377 aaKnown RBP11.07□□□□□ -0.64
LIMS2-210ENST00000413578 MED12Q93074 2177 aa11.07□□□□□ -0.64
LIMS2-210ENST00000413578 STAB1Q9NY15 2570 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms