RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SATB2Q9UPW6 733 aa4.04□□□□□ -1.76
BRCA1-204ENST00000412061 ZHX2Q9Y6X8 837 aa4.04□□□□□ -1.76
BRCA1-204ENST00000412061 COMMD3-BMI1R4GMX3 469 aa4.04□□□□□ -1.76
BRCA1-204ENST00000412061 PTPRUQ92729 1446 aa4.04□□□□□ -1.76
BRCA1-204ENST00000412061 ARID2Q68CP9 1835 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 OR2AG2A6NM03 316 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 C2CD4DB7Z1M9 353 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NPPAP01160 153 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 VTNP04004 478 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ALPIP09923 528 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 DBTP11182 482 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 DARSP14868 501 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NT5EP21589 574 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 GPX3P22352 226 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ACKR3P25106 362 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NF2P35240 595 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NUP62P37198 522 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 CCR4P51679 360 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 AP3M2P53677 418 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 B3GALT5-AS1P59052 145 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 SEC61GP60059 68 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 PPIAP62937 165 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 EEF1A1P68104 462 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NAAAQ02083 359 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 LTBQ06643 244 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 SLC20A2Q08357 652 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 OR1C1Q15619 314 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 LRRC37A5PQ49AS3 106 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 LINC01620Q4KN68 170 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ASPRV1Q53RT3 343 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 XKR3Q5GH77 459 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 EEF1A1P5Q5VTE0 462 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 OR4C11Q6IEV9 310 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF841Q6ZN19 808 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 BZW1Q7L1Q6 419 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 G2E3Q7L622 706 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 PIWIL4Q7Z3Z4 852 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 GPBP1Q86WP2 473 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ODF3L1Q8IXM7 274 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 PARP8Q8N3A8 854 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ARFGAP2Q8N6H7 521 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 SMRP1Q8NCR6 262 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 OR1J1Q8NGS3 322 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 OLIG1Q8TAK6 271 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 GRHL3Q8TE85 626 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 TCP11Q8WWU5 503 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 PIGCQ92535 297 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 PIK3R3Q92569 461 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NEUROG1Q92886 237 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 COQ2Q96H96 371 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ADGRG7Q96K78 797 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 C12orf66Q96MD2 445 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ANKRD27Q96NW4 1050 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 PANX1Q96RD7 426 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ERGIC2Q96RQ1 377 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 CHRDL1Q9BU40 450 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 RAB11FIP5Q9BXF6 653 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 IQCGQ9H095 443 aaKnown RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 GLT8D2Q9H1C3 349 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 HAUS4Q9H6D7 363 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 UBTD1Q9HAC8 227 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 EXOC1Q9NV70 894 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 DBF4Q9UBU7 674 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-204ENST00000412061 IL36AQ9UHA7 158 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 KCNS2Q9ULS6 477 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 KLHDC2Q9Y2U9 406 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF175Q9Y473 711 aa4.03□□□□□ -1.76
BRCA1-204ENST00000412061 SRRM3A6NNA2 597 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SRRM4A7MD48 611 aaKnown RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 WASHC1A8K0Z3 465 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 TCP11X1B4DZS4 312 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 RNF113AO15541 343 aaKnown RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ARHGEF9O43307 516 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 AKR7A2O43488 359 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 CDH16O75309 829 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 NDUFB10O96000 172 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 OTCP00480 354 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 NGFRP08138 427 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 GP1BBP13224 206 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 NCK1P16333 377 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 MSH3P20585 1137 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 PSMA2P25787 234 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 NMT1P30419 496 aaKnown RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 CCKBRP32239 447 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 AHRP35869 848 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 MATKP42679 507 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SLC11A1P49279 550 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 CDH11P55287 796 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 HERVK_113P63132 956 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ERVK-8P63133 956 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 RELQ04864 619 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 ENPEPQ07075 957 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SNTA1Q13424 505 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 RBM39Q14498 530 aaKnown RBP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SF3B4Q15427 424 aaKnown RBP eCLIP4.02□□□□□ -1.77
BRCA1-204ENST00000412061 SYPL1Q16563 259 aa4.02□□□□□ -1.77
BRCA1-204ENST00000412061 PARP6Q2NL67 630 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms