RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 HNRNPA0Q13151 305 aaKnown RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 BTG3Q14201 252 aaPredicted RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 TMEM132DQ14C87 1099 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 SPHARQ15513 63 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 TRIP10Q15642 601 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 DPYSL2Q16555 572 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 ARMC12Q5T9G4 340 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 TTC23Q5W5X9 447 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 SEL1L3Q68CR1 1132 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 OR4C11Q6IEV9 310 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 SLC39A4Q6P5W5 647 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 CYP4V2Q6ZWL3 525 aaPredicted RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 FAM228AQ86W67 206 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 PSTKQ8IV42 348 aaKnown RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 APLFQ8IW19 511 aaPredicted RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 SLC37A3Q8NCC5 494 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 DYRK2Q92630 601 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 HIST1H2ACQ93077 130 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 TMEM45BQ96B21 275 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 UBAC1Q9BSL1 405 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 APMAPQ9HDC9 416 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 RPRD1BQ9NQG5 326 aaKnown RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
LSM5-206ENST00000409987 OR10H1Q9Y4A9 318 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 WIZO95785 1651 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 PTPRMP28827 1452 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 MROH5Q6ZUA9 1318 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 PRG4Q92954 1404 aaPredicted RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 A0A075B6Q4 140 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 MTMR11A4FU01 709 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 DNALI1O14645 258 aaPredicted RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 ARPC1BO15143 372 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 EML2O95834 649 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 AGTP01019 485 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 CSF2P04141 144 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 PATE4P0C8F1 98 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 GP9P14770 177 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 MAP2K2P36507 400 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 CAPGP40121 348 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 PPT1P50897 306 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 SELPLGQ14242 412 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 ARHGAP19Q14CB8 494 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 HEPACAMQ14CZ8 416 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 EXOSC7Q15024 291 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 HADHQ16836 314 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 EXOC3L2Q2M3D2 409 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 ZNF790Q6PG37 636 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 BLOC1S2Q6QNY1 142 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 UBQLNLQ8IYU4 475 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 DCLK2Q8N568 766 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 NECAB1Q8N987 351 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 OR4C15Q8NGM1 316 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 OR6M1Q8NGM8 313 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 TRMT10AQ8TBZ6 339 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 PNPT1Q8TCS8 783 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 APOBEC4Q8WW27 367 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 EMG1Q92979 244 aaKnown RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 CXorf58Q96LI9 332 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 S1PR3Q99500 378 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 MTG1Q9BT17 334 aaPredicted RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 FUNDC2Q9BWH2 189 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 DPEP2Q9H4A9 486 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 RPAP3Q9H6T3 665 aaPredicted RBP4.49□□□□□ -1.69
LSM5-206ENST00000409987 EGLN3Q9H6Z9 239 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 EXO5Q9H790 373 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 P2RX2Q9UBL9 471 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 IL36AQ9UHA7 158 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 CRLS1Q9UJA2 301 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 NCKAP1Q9Y2A7 1128 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 SLCO1B1Q9Y6L6 691 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 SHROOM2Q13796 1616 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 PIK3R4Q99570 1358 aa4.49□□□□□ -1.69
LSM5-206ENST00000409987 PCF11O94913 1555 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 SMCHD1A6NHR9 2005 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 TSPOAP1O95153 1857 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM240BA0A1B0GVZ2 78 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ATP6AP2A0A1C7CYW4 349 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 RNF222A6NCQ9 220 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 OR52A4PA6NMU1 304 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 PPIAL4DF5H284 164 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM72CH0Y354 149 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 M0QX08 132 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 SDHDO14521 159 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 PCDH7O60245 1069 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 BCAS1O75363 584 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 CDC123O75794 336 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 KRT33AO76009 404 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 AP2A2O94973 939 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 PAK4O96013 591 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 CAPN1P07384 714 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 POLR2MP0CAP2 368 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ZNF44P15621 663 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 GJB2P29033 226 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 CCT6AP40227 531 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 ALDH3B1P43353 468 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ETV1P50549 477 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 HSPA2P54652 639 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms