RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 UBE2V1Q13404 147 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 HLXQ14774 488 aaPredicted RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 SF3B4Q15427 424 aaKnown RBP eCLIP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 HIST2H2ACQ16777 129 aaPredicted RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 XKR4Q5GH76 650 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 KIAA1755Q5JYT7 1200 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 ANKRD34AQ69YU3 496 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 FAM166AQ6J272 317 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 APOBEC3HQ6NTF7 200 aaKnown RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 SLC39A5Q6ZMH5 540 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 DHDDSQ86SQ9 333 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 SYT12Q8IV01 421 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 LRRC56Q8IYG6 542 aaPredicted RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 FITM2Q8N6M3 262 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 OR14K1Q8NGZ2 314 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 VANGL1Q8TAA9 524 aaPredicted RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 SUSD6Q92537 303 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 P3H4Q92791 437 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 ERLEC1Q96DZ1 483 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 DUS3LQ96G46 650 aaKnown RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 ZC3HAV1LQ96H79 300 aaKnown RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 C9orf72Q96LT7 481 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 TSNARE1Q96NA8 513 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 XPO6Q96QU8 1125 aaKnown RBP4.06□□□□□ -1.76
GTDC1-206ENST00000409214 GPA33Q99795 319 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 C10orf88Q9H8K7 445 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 CCNB1IP1Q9NPC3 277 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 ZNF302Q9NR11 478 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 FGFR1OP2Q9NVK5 253 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 GRHL1Q9NZI5 618 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 SLC7A8Q9UHI5 535 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 ADAMTS7Q9UKP4 1686 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 DISP2A7MBM2 1401 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 SNED1Q8TER0 1413 aa4.06□□□□□ -1.76
GTDC1-206ENST00000409214 POC1B-GALNT4F8VUJ3 575 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 MATN2O00339 956 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 NBR2O15453 112 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 KDELR3O43731 214 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 GLRA3O75311 464 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 BCAS1O75363 584 aaPredicted RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 WBP4O75554 376 aaKnown RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CPNE6O95741 557 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 POMCP01189 267 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 FURINP09958 794 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 SMIM18P0DKX4 95 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 TSPAN8P19075 237 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 TNFRSF4P43489 277 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 KIR2DL1P43626 348 aaPredicted RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 LHX1P48742 406 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 ACADVLP49748 655 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CHN2P52757 468 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PEX3P56589 373 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 BPIFB4P59827 614 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 HERV-K104P63124 156 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 DNASE1L3Q13609 305 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 MOGQ16653 247 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PNLIPRP3Q17RR3 467 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 THOC7Q6I9Y2 204 aaKnown RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PRR23BQ6ZRT6 265 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 TRPM8Q7Z2W7 1104 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 ZNF551Q7Z340 670 aaPredicted RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 MAVSQ7Z434 540 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 AKAP14Q86UN6 197 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CACUL1Q86Y37 369 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 FBXL6Q8N531 539 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 NETO2Q8NC67 525 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CCDC197Q8NCU1 140 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 GJC3Q8NFK1 279 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 NETO1Q8TDF5 533 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 LPPQ93052 612 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 R3HDM4Q96D70 268 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PRR25Q96S07 402 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 AGPAT1Q99943 283 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CADM1Q9BY67 442 aaKnown RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 SNX25Q9H3E2 840 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 ELOVL6Q9H5J4 265 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 C8orf4Q9NR00 106 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 SMPD4Q9NXE4 827 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 RAXQ9Y2V3 346 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CSDC2Q9Y534 153 aaKnown RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 KLF2Q9Y5W3 355 aaPredicted RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 BCL9LQ86UU0 1499 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 ESYT2A0FGR8 921 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 SHISA8B8ZZ34 492 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 F8W735 103 aaPredicted RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PRAMEF26H0Y7S4 382 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PRYO14603 147 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 TOM1O60784 492 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PRAMEF11O60813 436 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CNTN5O94779 1100 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 FCER2P06734 321 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 SP9P0CG40 484 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 ETFAP13804 333 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 LAP3P28838 519 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CHRNA5P30532 468 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 CFHR2P36980 270 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 NSFP46459 744 aaKnown RBP4.05□□□□□ -1.76
GTDC1-206ENST00000409214 THOP1P52888 689 aa4.05□□□□□ -1.76
GTDC1-206ENST00000409214 PGGT1BP53609 377 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms