RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 HPCAL1P37235 193 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 CD96P40200 585 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SSR4P51571 173 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 NCBP2P52298 156 aaKnown RBP eCLIP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SLC37A1P57057 533 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 HSPB3Q12988 150 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 DUSP8Q13202 625 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 EBPQ15125 230 aaKnown RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 INPP5JQ15735 1006 aaPredicted RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 IGFBP7Q16270 282 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ZNF628Q5EBL2 1059 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 C6orf136Q5SQH8 315 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 IL23RQ5VWK5 629 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ATG16L1Q676U5 607 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 TMEM107Q6UX40 140 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 TRIM42Q8IWZ5 723 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 CCDC116Q8IYX3 515 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 OR52R1Q8NGF1 315 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SUN3Q8TAQ9 357 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 RAB3IL1Q8TBN0 382 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 LRRC8CQ8TDW0 803 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 HAS2Q92819 552 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 CIDECQ96AQ7 238 aaPredicted RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 PPCDCQ96CD2 204 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 METTL2AQ96IZ6 378 aaKnown RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 RASL10BQ96S79 203 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ITPAQ9BY32 194 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 WWTR1Q9GZV5 400 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 OR10A5Q9H207 317 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ASF1BQ9NVP2 202 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 EHD3Q9NZN3 535 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 MYOTQ9UBF9 498 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 HAO1Q9UJM8 370 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 PSME2Q9UL46 239 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ERVK-11Q9UQG0 969 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 FREM3P0C091 2139 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 NINQ8N4C6 2090 aa9.52□□□□□ -0.88
TSPAN9-202ENST00000407263 A8MVJ9 347 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 G3V3Y1 287 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SDHDO14521 159 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SCAMP2O15127 329 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 NEURL1O76050 574 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SNUPNO95149 360 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 CBX7O95931 251 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 GPX3P22352 226 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 GALNSP34059 522 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 MC3RP41968 323 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 UQCRFS1P47985 274 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 CYB561P49447 251 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 HLCSP50747 726 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 NR0B1P51843 470 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 OCRLQ01968 901 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 MGAT2Q10469 447 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 FUT7Q11130 342 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 ZNF155Q12901 538 aaPredicted RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 BIKQ13323 160 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 TRMT12Q53H54 448 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 HLA-DQA1Q5Y7H0 255 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 FAM180AQ6UWF9 173 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 IL20RBQ6UXL0 311 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 TMEM64Q6YI46 380 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SZRD1Q7Z422 152 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 GALNTL5Q7Z4T8 443 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 PRR22Q8IZ63 422 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 KRTCAP2Q8N6L1 136 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 C7orf57Q8NEG2 295 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 C16orf52Q8NHV5 167 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 NUBPLQ8TB37 319 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SLC22A8Q8TCC7 542 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 GRHL3Q8TE85 626 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 ZNF75CPQ92670 426 aaPredicted RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SNRNP40Q96DI7 357 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 MAGED4Q96JG8 741 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 REEP4Q9H6H4 257 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 INTS9Q9NV88 658 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 THAP1Q9NVV9 213 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 HPF1Q9NWY4 346 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 SH3BP4Q9P0V3 963 aa9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 YARS2Q9Y2Z4 477 aaKnown RBP9.52□□□□□ -0.89
TSPAN9-202ENST00000407263 A0A0G2JMM0 328 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 C2orf92A0A1B0GVN3 265 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 A0A1W2PPB8 328 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 A0A1W2PRS3 328 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 OR6C76A6NM76 312 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 KIR3DP1A8MWS1 328 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 MYO1GB0I1T2 1018 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 J3QKU1 62 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 NADKO95544 446 aaPredicted RBP9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 G6PDP11413 515 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 CD46P15529 392 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 SOX18P35713 384 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 RFC3P40938 356 aa9.51□□□□□ -0.89
TSPAN9-202ENST00000407263 ASMTP46597 345 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms