RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LAMTOR5O43504 91 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 MT-CO2P00403 227 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 GSTM4Q03013 218 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 GAS6Q14393 721 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 COL28A1Q2UY09 1125 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 C6orf120Q7Z4R8 191 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 SLC35B2Q8TB61 432 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 MEN1O00255 615 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 PIGRP01833 764 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 CREB1P16220 341 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 ATG9BQ674R7 924 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 TRIM46Q7Z4K8 759 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 MAELQ96JY0 434 aaKnown RBP11.53□□□□□ -0.56
SMCR8-201ENST00000406438 FAM86C1Q9NVL1 165 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 PIKFYVEQ9Y2I7 2098 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 H0YAE9 185 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 PEX10O60683 326 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 PGCP20142 388 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 BTBD16Q32M84 506 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 TIFABQ6ZNK6 161 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 CSNK1A1LQ8N752 337 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 OR9I1Q8NGQ6 314 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 ADAMTS18Q8TE60 1221 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 TCEAL4Q96EI5 215 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 DNAJA3Q96EY1 480 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 PHIPQ8WWQ0 1821 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 ZNF318Q5VUA4 2279 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 JUNDP17535 347 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 GPR139Q6DWJ6 353 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 UGT2A3Q6UWM9 527 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 PFDN5Q99471 154 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 UNKLQ9H9P5 680 aaKnown RBP11.53□□□□□ -0.56
SMCR8-201ENST00000406438 MAN2C1Q9NTJ4 1040 aa11.53□□□□□ -0.56
SMCR8-201ENST00000406438 H2AFB2P0C5Z0 115 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 TNFSF4P23510 183 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 KIAA0319Q5VV43 1072 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 AWAT2Q6E213 333 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 NANOGP8Q6NSW7 305 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 HACD2Q6Y1H2 254 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 TXNDC5Q8NBS9 432 aaKnown RBP11.52□□□□□ -0.56
SMCR8-201ENST00000406438 NANOGQ9H9S0 305 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 SRRDQ9UH36 339 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 ZFC3H1O60293 1989 aaKnown RBP11.52□□□□□ -0.56
SMCR8-201ENST00000406438 A0A1W2PP55 124 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 ANKRD33BA6NCL7 494 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 MAN2B1O00754 1011 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 GSRP00390 522 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 IFNA10P01566 189 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 ADRB3P13945 408 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 RAB4AP20338 218 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 RPS3P23396 243 aaKnown RBP eCLIP11.52□□□□□ -0.56
SMCR8-201ENST00000406438 ETV3P41162 512 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 TBPL1P62380 186 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 GINS1Q14691 196 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 MFSD13AQ14CX5 517 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 TBRG1Q3YBR2 411 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 GSG1LQ6UXU4 331 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 TTLL10Q6ZVT0 673 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 CCDC71LQ8N9Z2 235 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 C7orf34Q96L11 122 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 C12orf42Q96LP6 360 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 SYT4Q9H2B2 425 aa11.52□□□□□ -0.56
SMCR8-201ENST00000406438 A0A1W2PPK0 400 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 SLC22A31A6NKX4 558 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 RBM39Q14498 530 aaKnown RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 ATAD3CQ5T2N8 411 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 WDR92Q96MX6 357 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 GHRLQ9UBU3 117 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 NAALAD2Q9Y3Q0 740 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 SEC16AO15027 2179 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 TVP23AA6NH52 213 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 PAK4O96013 591 aaPredicted RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 PNMTP11086 282 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 HNRNPKP61978 463 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 MZT1Q08AG7 82 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 PIGGQ5H8A4 983 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 NID2Q14112 1375 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 CD8B2A6NJW9 211 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 OXSR1O95747 527 aaPredicted RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 CD8BP10966 210 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 ELK4P28324 431 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 NIPAL4Q0D2K0 466 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 TMEM205Q6UW68 189 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 OR14K1Q8NGZ2 314 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 KCNK13Q9HB14 408 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 GXYLT2A0PJZ3 443 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 C1orf226A1L170 272 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 MTMR11A4FU01 709 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 NOTOA8MTQ0 251 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 OTX2P32243 289 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 HNF1BP35680 557 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 RAB11BQ15907 218 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 MOGQ16653 247 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 C6orf183Q5T699 404 aa11.52□□□□□ -0.57
SMCR8-201ENST00000406438 CDCA2Q69YH5 1023 aaPredicted RBP11.52□□□□□ -0.57
SMCR8-201ENST00000406438 KBTBD6Q86V97 674 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms