RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SNAPC1Q16533 368 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LRRC73Q5JTD7 316 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CLLU1OSQ5K130 101 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 RGS7BPQ6MZT1 257 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM220Q6QAJ8 160 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 KYAT3Q6YP21 454 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PAGE2Q7Z2X7 111 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PRICKLE2Q7Z3G6 844 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 FOXRED2Q8IWF2 684 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PPFIBP2Q8ND30 876 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 C9orf43Q8TAL5 461 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GDPD5Q8WTR4 605 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ING5Q8WYH8 240 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 THOC3Q96J01 351 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 DNAJC1Q96KC8 554 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 MRGPRX2Q96LB1 330 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM185BQ9H7F4 350 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZFAND3Q9H8U3 227 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CALHM2Q9HA72 323 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GPAMQ9HCL2 828 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PISDQ9UG56 409 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 FBXO5Q9UKT4 447 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TBC1D24Q9ULP9 559 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 MGAT4BQ9UQ53 548 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPTBN5Q9NRC6 3674 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 REV3LO60673 3130 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 C13orf42A0A1B0GVH6 325 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PIPSLA2A3N6 862 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 FAM149AA5PLN7 773 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CD8B2A6NJW9 211 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SOBPA7XYQ1 873 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 HACD1B0YJ81 288 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TRAFD1O14545 582 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ABCD4O14678 606 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SMIM24O75264 130 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 POLR2CP19387 275 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GKP32189 559 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CD80P33681 288 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 HMGCLP35914 325 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 RGRP47804 291 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 FOXA1P55317 472 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCL23P55773 120 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 RPS15P62841 145 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 KLC1Q07866 573 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CAPRIN1Q14444 709 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PDCD4Q53EL6 469 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LBHQ53QV2 105 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPANXN3Q5MJ09 141 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SEL1L3Q68CR1 1132 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CWF19L1Q69YN2 538 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LRRC8EQ6NSJ5 796 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM207Q6UWW9 146 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SPRED1Q7Z699 444 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 DEFB128Q7Z7B8 93 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 BEND2Q8NDZ0 799 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR10S1Q8NGN2 331 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GPX8Q8TED1 209 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 AP2M1Q96CW1 435 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SEMA4CQ9C0C4 833 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ASB8Q9H765 288 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CHST11Q9NPF2 352 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PAK6Q9NQU5 681 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SIDT1Q9NXL6 827 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 NCKIPSDQ9NZQ3 722 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDH9Q9ULB4 789 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 NEU3Q9UQ49 428 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 MRPS33Q9Y291 106 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 DTX4Q9Y2E6 619 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ACOT9Q9Y305 439 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 NUP214P35658 2090 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMPRSS2O15393 492 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SEC14L5O43304 696 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZNF208O43345 1280 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 COCHO43405 550 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GRID2O43424 1007 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 IDH3BO43837 385 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SCN2BO60939 215 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ATG13O75143 517 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GLCEO94923 617 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 WDR47O94967 919 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GRPP07492 148 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 POLR2EP19388 210 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PSMB6P28072 239 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SGSHP51688 502 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 EPHA5P54756 1037 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 DGCR6Q14129 220 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 E2F2Q14209 437 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PRPSAP1Q14558 356 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 C18orf21Q32NC0 220 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZMAT1Q5H9K5 638 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LHX8Q68G74 356 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 FBXL22Q6P050 247 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ZC3H14Q6PJT7 736 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 RTL4Q6ZR62 310 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GPRIN3Q6ZVF9 776 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 ERASQ7Z444 233 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 AMIGO2Q86SJ2 522 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 GPR180Q86V85 440 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms