RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 PCDHGB2Q9Y5G2 931 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 PRAMEF27A3QJZ7 478 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 HOXC11O43248 304 aaPredicted RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 FGBP02675 491 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 TP53P04637 393 aaPredicted RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 SLC35G4P0C7Q5 338 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 LINC00271P0C7V0 271 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 MMP11P24347 488 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 BUD31P41223 144 aaPredicted RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 ANXA11P50995 505 aaKnown RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.432e-8■□□□□ 8.3
PRAME-201ENST00000398741 PRKAG1P54619 331 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 MESP2Q0VG99 397 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 MLC1Q15049 377 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 SF3B4Q15427 424 aaKnown RBP eCLIP12.38□□□□□ -0.432e-46■□□□□ 9
PRAME-201ENST00000398741 SNAPC1Q16533 368 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 SYT14P1Q58G82 188 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 ZMAT1Q5H9K5 638 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 ZNF517Q6ZMY9 492 aaPredicted RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 ZER1Q7Z7L7 766 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 MMAAQ8IVH4 418 aaKnown RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 RAB42Q8N4Z0 105 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 OTUB1Q96FW1 271 aaPredicted RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 WDFY2Q96P53 400 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 LRRC3BQ96PB8 259 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 BBS4Q96RK4 519 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 NELL2Q99435 816 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 DPH7Q9BTV6 452 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 FAIM2Q9BWQ8 316 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 PITHD1Q9GZP4 211 aaPredicted RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 GLIPR2Q9H4G4 154 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 RERGLQ9H628 205 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 CTPS2Q9NRF8 586 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 MUTYHQ9UIF7 546 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 ADAM29Q9UKF5 820 aa12.38□□□□□ -0.43
PRAME-201ENST00000398741 MRPS23Q9Y3D9 190 aaKnown RBP12.38□□□□□ -0.43
PRAME-201ENST00000398741 IQCMA0A1B0GVH7 501 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 EPHX1P07099 455 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 NR2F6P10588 404 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 EPCAMP16422 314 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 GIPRP48546 466 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SMSP52788 366 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 TRA2BP62995 288 aaKnown RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 NDUFAF5Q5TEU4 345 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 FAM131AQ6UXB0 335 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 CD300LDQ6UXZ3 194 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 ADAMTSL4Q6UY14 1074 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 OLIG3Q7RTU3 272 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 RAB43Q86YS6 212 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 UBQLNLQ8IYU4 475 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 GALNT6Q8NCL4 622 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 UCN3Q969E3 161 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 COX14Q96I36 57 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 C17orf62Q9BQA9 187 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 TXNL4BQ9NX01 149 aaKnown RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 SPIN1Q9Y657 262 aaPredicted RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 PRRC2BQ5JSZ5 2229 aaKnown RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 LINC00854A0A1B0GVQ3 168 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SNTNA6NMZ2 147 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 IL1AP01583 271 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 ACADMP11310 421 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 IL7P13232 177 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 DRD2P14416 443 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 GSTM3P21266 225 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 RCVRNP35243 200 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 ETV5P41161 510 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 HTR3AP46098 478 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SLC6A11P48066 632 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 TGM4P49221 684 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 ETV1P50549 477 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 DAB2P98082 770 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SCN1BQ07699 218 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 HNRNPA0Q13151 305 aaKnown RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 GNA13Q14344 377 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 NDUFA5Q16718 116 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 KIAA1211LQ6NV74 962 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 UBE3DQ7Z6J8 389 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 HMGN2P46Q86SG4 172 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 COMTD1Q86VU5 262 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 AMER3Q8N944 861 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 Q8N9G6 341 aaPredicted RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 OR6T1Q8NGN1 323 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 AMDHD1Q96NU7 426 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
PRAME-201ENST00000398741 DDX31Q9H8H2 851 aaKnown RBP12.37□□□□□ -0.43
PRAME-201ENST00000398741 TIGARQ9NQ88 270 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms