RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 KRT33BQ14525 404 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MAD2L1BPQ15013 274 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TRILQ7L0X0 811 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ADGRF3Q8IZF5 1079 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 LINC01555Q8NAE3 123 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MAGEE2Q8TD90 523 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 BHMTQ93088 406 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 COG8Q96MW5 612 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 EGFL7Q9UHF1 273 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 LOC100130705A0A1B0GUX0 176 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ZAR1LA6NP61 321 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CLCA1A8K7I4 914 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC1A7O00341 560 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TBX6O95947 436 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ALOX5P09917 674 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 BMP1P13497 986 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 BDKRB1P46663 353 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 VLDLRP98155 873 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ATP1A4Q13733 1029 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SCARB2Q14108 478 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 C16orf72Q14CZ0 275 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 MICAQ29983 383 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CEACAM20Q6UY09 585 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TAGAPQ8N103 731 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 OR4C15Q8NGM1 316 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 BORCS5Q969J3 196 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 C10orf90Q96M02 699 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 BBS4Q96RK4 519 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 G6PC3Q9BUM1 346 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF350Q9GZX5 532 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 EXOSC3Q9NQT5 275 aaKnown RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 NLGN3Q9NZ94 848 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 A0A075B6Q4 140 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ADAM23O75077 832 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ACP5P13686 325 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 STAT5AP42229 794 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC6A11P48066 632 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 GIPRP48546 466 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 HSF2Q03933 536 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TSPAN31Q12999 210 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC13A2Q13183 592 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TRA2AQ13595 282 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF311Q5JNZ3 666 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 C3orf38Q5JPI3 329 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF648Q5T619 568 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 MFSD12Q6NUT3 480 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 NAT16Q8N8M0 369 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 FAM181AQ8N9Y4 354 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ATG16L2Q8NAA4 619 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 FAM46DQ8NEK8 389 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 OR5AR1Q8NGP9 310 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC38A5Q8WUX1 472 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 OSTF1Q92882 214 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 LGR4Q9BXB1 951 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 DUSP15Q9H1R2 295 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PLGRKTQ9HBL7 147 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SIRT3Q9NTG7 399 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TEKT2Q9UIF3 430 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 NCOA6Q14686 2063 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ZBTB11O95625 1053 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 IL3P08700 152 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 NR2C1P13056 603 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CCNA2P20248 432 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ACSM1Q08AH1 577 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TPBGQ13641 420 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 DSG2Q14126 1118 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PARM1Q6UWI2 310 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 OR52E1Q8NGJ3 308 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 DNAJA4Q8WW22 397 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 OR1E3Q8WZA6 343 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TAAR2Q9P1P5 351 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PLCL2Q9UPR0 1127 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 POLHQ9Y253 713 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 BTBD3Q9Y2F9 522 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 DNAH12Q6ZR08 3092 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TNFRSF11BO00300 401 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TO15178 435 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CCNB2O95067 398 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 STSP08842 583 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 LINGO3P0C6S8 592 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CHRNB1P11230 501 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 GABRG2P18507 467 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TSPAN8P19075 237 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 FOXK2Q01167 660 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 GAB1Q13480 694 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ZNHIT3Q15649 155 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PRPF38BQ5VTL8 546 aaKnown RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 MISPQ8IVT2 679 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 NAGSQ8N159 534 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 C15orf40Q8WUR7 153 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CDK15Q96Q40 435 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 GAS2L1Q99501 681 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TOR3AQ9H497 397 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 NMNAT1Q9HAN9 279 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLAMF8Q9P0V8 285 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 GMPPBQ9Y5P6 360 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CENPBD1B2RD01 187 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SERPINA1P01009 418 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PORP16435 677 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 RPS4Y1P22090 263 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms