RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CARS2Q9HA77 564 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ACAD8Q9UKU7 415 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 B4GALT3O60512 393 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 HCN1O60741 890 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ITGA10O75578 1167 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CXCL10P02778 98 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TP53P04637 393 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PDHA2P29803 388 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MANFP55145 182 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TRA2BP62995 288 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 IFITM3Q01628 133 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CD300CQ08708 224 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 IKZF1Q13422 519 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 FAM198BQ6UWH4 519 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PAMR1Q6UXH9 720 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GDPD4Q6W3E5 623 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CLDN19Q8N6F1 224 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 COL26A1Q96A83 441 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MSLNLQ96KJ4 702 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 DPH2Q9BQC3 489 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 POLDIP3Q9BY77 421 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MFRPQ9BY79 579 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TM6SF2Q9BZW4 377 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ABCG5Q9H222 651 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ZDHHC6Q9H6R6 413 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 FZD3Q9NPG1 666 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MARCH5Q9NX47 278 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 KLHL21Q9UJP4 597 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ZFP37Q9Y6Q3 630 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 WDR90Q96KV7 1748 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 C1orf226A1L170 272 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TAPBPO15533 448 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GREM1O60565 184 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SOD2P04179 222 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 OR4Q2P0C623 313 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ASAH1Q13510 395 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GPR19Q15760 415 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 LRIT3Q3SXY7 679 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GTDC1Q4AE62 458 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 RTP2Q5QGT7 225 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SFRP4Q6FHJ7 346 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SLC25A25Q6KCM7 469 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 HSDL2Q6YN16 418 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GALNT10Q86SR1 603 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ZFP41Q8N8Y5 198 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TSEN15Q8WW01 171 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 KCTD12Q96CX2 325 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GLTPQ9NZD2 209 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 POM121CA8CG34 1229 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 COCHO43405 550 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CSN2P05814 226 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CRISP1P54107 249 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 DUSP4Q13115 394 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TNFAIP8L2Q6P589 184 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TRAM1L1Q8N609 369 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 RFKQ969G6 155 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CPNE2Q96FN4 548 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SAMD11Q96NU1 681 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SLAMF7Q9NQ25 335 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 EQTNQ9NQ60 294 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF275Q9NSD4 429 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MGAT4CQ9UBM8 478 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CHD5Q8TDI0 1954 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 C5orf51A6NDU8 294 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF670-ZNF695F2Z2N8 137 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CTDSP2O14595 271 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 GPR37L1O60883 481 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FGF19O95750 216 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PDGFAP04085 211 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 RAB3BP20337 219 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SEMG2Q02383 582 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 HSPB3Q12988 150 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SELENBP1Q13228 472 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 GPR50Q13585 617 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 GRIN2CQ14957 1233 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SMN1Q16637 294 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 LRRC37A5PQ49AS3 106 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FAM76BQ5HYJ3 339 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 REEP3Q6NUK4 255 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 KLHL24Q6TFL4 600 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 MRGPREQ86SM8 312 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 BOLLQ8N9W6 283 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PIGXQ8TBF5 258 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 WDR20Q8TBZ3 569 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 GPR152Q8TDT2 470 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 NECTIN4Q96NY8 510 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 C7orf50Q9BRJ6 194 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM185BQ9H7F4 350 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 MARK1Q9P0L2 795 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZAR1LA6NP61 321 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF705EA8MWA4 302 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 LRRN3E7EW58 273 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 HOXC11O43248 304 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SCO2O43819 266 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SLC10A3P09131 477 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 HK1P19367 917 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TEAD1P28347 426 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 DAPP51397 102 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms