RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 OR51B5Q9H339 312 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 SH2B3Q9UQQ2 575 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 PCDHGB7Q9Y5F8 929 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 A0A0G2JMP0 313 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 LINC00854A0A1B0GVQ3 168 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 A0A1W2PRQ8 180 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 H3BN98 237 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 PAPLNO95428 1278 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 C1QBP02746 253 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 TSPAN19P0C672 248 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 CYP2A6P11509 494 aaPredicted RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 HLA-FP30511 346 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 SDC2P34741 201 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 SOAT1P35610 550 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 MAP2K3P46734 347 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 PPP3R1P63098 170 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 CDK5Q00535 292 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 CD83Q01151 205 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 NDUFA9Q16795 377 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 RPS26P11Q5JNZ5 115 aaPredicted RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 LCN1P1Q5VSP4 162 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 Q6ZVL8 140 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 LAPTM4BQ86VI4 370 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 OR4D11Q8NGI4 311 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 TMEM163Q8TC26 289 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ENKURQ8TC29 256 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 SLC7A13Q8TCU3 470 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 TM9SF4Q92544 642 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 TMEM19Q96HH6 336 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 PPP1R16AQ96I34 528 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ZFYVE19Q96K21 471 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF582Q96NG8 517 aaPredicted RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 RBFOX1Q9NWB1 397 aaKnown RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 NDRG2Q9UN36 371 aaKnown RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 YBX2Q9Y2T7 364 aaKnown RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 BCHEP06276 602 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 KLK1P06870 262 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 FHP07954 510 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 IL3P08700 152 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 ACADMP11310 421 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 P2RX3P56373 397 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 GPLD1P80108 840 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 DAB2P98082 770 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 KLHL22Q53GT1 634 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 PYDC2Q56P42 97 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 PLET1Q6UQ28 207 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 GRASPQ7Z6J2 395 aaPredicted RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 MRGPREQ86SM8 312 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 NATD1Q8N6N6 113 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 YIPF7Q8N8F6 280 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 CHST14Q8NCH0 376 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF485Q8NCK3 441 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 NLGN4YQ8NFZ3 816 aaPredicted RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 FOPNLQ96NB1 174 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 KCNJ15Q99712 375 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 A4GNTQ9UNA3 340 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 IRGMA1A4Y4 181 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 OR6C70A6NIJ9 312 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 SAP18O00422 153 aaKnown RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 TLX2O43763 284 aaPredicted RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 BNIP3LO60238 219 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 CSF2P04141 144 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 PDHA2P29803 388 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 GABRA5P31644 462 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 FRKP42685 505 aaPredicted RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 CLDN20P56880 219 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 RPS25P62851 125 aaKnown RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 NTHL1P78549 312 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 ATAT1Q5SQI0 421 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 IER5LQ5T953 404 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 NXPE4Q6UWF7 544 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 TRIM48Q8IWZ4 208 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 ATP6V1C2Q8NEY4 427 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 OR5P2Q8WZ92 322 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 ZSWIM3Q96MP5 696 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 GTPBP2Q9BX10 602 aaKnown RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 SPNS1Q9H2V7 528 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 GIMAP4Q9NUV9 329 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 TVP23BQ9NYZ1 205 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 DYRK1BQ9Y463 629 aa12.6□□□□□ -0.39
TRIM40-207ENST00000396581 SPIN1Q9Y657 262 aaPredicted RBP12.6□□□□□ -0.39
TRIM40-207ENST00000396581 KIF26AQ9ULI4 1882 aaPredicted RBP12.59□□□□□ -0.39
TRIM40-207ENST00000396581 A0A0X1KG70 313 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 TSPAN11A1L157 253 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 SLC30A4O14863 429 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 NR2F6P10588 404 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 ACP2P11117 423 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 ETV3P41162 512 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 GIPRP48546 466 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms