RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 IGHG1P01857 330 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 RPLP0P05388 317 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 HSP90AB1P08238 724 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 VIMP08670 466 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 ACSM4P0C7M7 580 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 TSPY3P0CV98 308 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 TSPY4P0CV99 314 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 TSPY8P0CW00 308 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 TSPY10P0CW01 314 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 C8orf88P0DMB2 117 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 GJA1P17302 382 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 NT5C2P49902 561 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 PNLIPRP2P54317 469 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 ELF3P78545 371 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 OTUD4Q01804 1114 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 FMODQ06828 376 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 UBE2V1Q13404 147 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 DPYSQ14117 519 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 RAB30Q15771 203 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 CCL14Q16627 93 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 PCK2Q16822 640 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 KNOP1Q1ED39 458 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 FBXL19-AS1Q494R0 122 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 C9orf64Q5T6V5 341 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 DCLRE1AQ6PJP8 1040 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 GCNT7Q6ZNI0 430 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 GET4Q7L5D6 327 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 CCDC13Q8IYE1 715 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 FBXO39Q8N4B4 442 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 FAM71E2Q8N5Q1 922 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 BANPQ8N9N5 519 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 WDR31Q8NA23 367 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 RPLP0P6Q8NHW5 317 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 ANGPTL6Q8NI99 470 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 SEH1LQ96EE3 360 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 DNAJC1Q96KC8 554 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 RNF145Q96MT1 663 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 FAM167BQ9BTA0 163 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 ABHD6Q9BV23 337 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 TIMM21Q9BVV7 248 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 PAPOLGQ9BWT3 736 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 LHX5Q9H2C1 402 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 EHD1Q9H4M9 534 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 SLA2Q9H6Q3 261 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 CCNB1IP1Q9NPC3 277 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 MCUBQ9NWR8 336 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 NDUFAF4Q9P032 175 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 KLK11Q9UBX7 282 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 PURGQ9UJV8 347 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 KCND3Q9UK17 655 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 PILRAQ9UKJ1 303 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 ZNF215Q9UL58 517 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 CDH9Q9ULB4 789 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 DAPP1Q9UN19 280 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 NAALADL1Q9UQQ1 740 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 SCML2Q9UQR0 700 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 RCL1Q9Y2P8 373 aaKnown RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 TMEM184BQ9Y519 407 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 PPIAL4AQ9Y536 164 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 RP1P56715 2156 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 DSCAML1Q8TD84 2053 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 ATG2BQ96BY7 2078 aa-1.31□□□□□ -2.62
RNU6-540P-201ENST00000384622 DOCK3Q8IZD9 2030 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 IGSF1Q8N6C5 1336 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 IGLV3-22A0A075B6J6 115 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 IGLV3-12A0A075B6K2 115 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 PPIAL4EA0A075B759 164 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 MEIKINA0A087WXM9 373 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 A0A096LNT2 108 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 TRGV5A0A0B4J1U4 118 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 PPIAL4CA0A0B4J2A2 164 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 LOC107984156A0A0G2JMH3 177 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 TRBV4-1A0A0J9YWV2 114 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 A0A1W2PPC4 97 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 LRRD1A4D1F6 860 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 PPIAL4DF5H284 164 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 H3BNG1 76 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 H7C1H1 209 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 IMPA2O14732 288 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 FPGTO14772 594 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 ZNF263O14978 683 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 SLC22A1O15245 554 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 INPP4BO15327 924 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 RRP8O43159 456 aaKnown RBP-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 SLC7A4O43246 635 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 OR6B1O95007 311 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 TSPAN13O95857 204 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 IGHV4-34P06331 123 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 HOXB5P09067 269 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 GNAO1P09471 354 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 PPIAL4FP0DN26 164 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 ADRB3P13945 408 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 PVRP15151 417 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 PEX2P28328 305 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 GPR183P32249 361 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 SOX6P35712 828 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 TAGLN2P37802 199 aaKnown RBP-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 GRIA1P42261 906 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 SLC26A2P50443 739 aa-1.32□□□□□ -2.62
RNU6-540P-201ENST00000384622 UFM1P61960 85 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms