RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RIN1Q13671 783 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 CDKL4Q5MAI5 379 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 GALNT10Q86SR1 603 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 C16orf78Q8WTQ4 265 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 URM1Q9BTM9 101 aaKnown RBP15.31■□□□□ 0.04
COL2A1-202ENST00000380518 KCNK12Q9HB15 430 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 ARMC1Q9NVT9 282 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 FBXL3Q9UKT7 428 aa15.31■□□□□ 0.04
COL2A1-202ENST00000380518 MAGED1Q9Y5V3 778 aaPredicted RBP15.31■□□□□ 0.04
COL2A1-202ENST00000380518 KNDC1Q76NI1 1749 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 A8MV72 311 aaPredicted RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 KCNJ13O60928 360 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 RP2O75695 350 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 ETV4P43268 484 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 PRSS48Q7RTY5 328 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 PHC2Q8IXK0 858 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 TMEM151AQ8N4L1 468 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 ELP5Q8TE02 316 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 NELL2Q99435 816 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 RNF38Q9H0F5 515 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 POLE4Q9NR33 117 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 TCRBV21S2A2A0A5A6 115 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 IL33O95760 270 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 SLC16A8O95907 504 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 ERCC1P07992 297 aaPredicted RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 CD70P32970 193 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 ACVR1BP36896 505 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 MTNR1AP48039 350 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 SNTB2Q13425 540 aaKnown RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 CMPK2Q5EBM0 449 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 GRHL2Q6ISB3 625 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 KLHDC8AQ8IYD2 350 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 C12orf76Q8N812 135 aaPredicted RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 FNDC8Q8TC99 324 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 ATG5Q9H1Y0 275 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 NANSQ9NR45 359 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 RXFP3Q9NSD7 469 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 GPR89AB7ZAQ6 455 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 GPR89BP0CG08 455 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 AAK1Q2M2I8 961 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 CCBE1Q6UXH8 406 aaPredicted RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 DENND6BQ8NEG7 585 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 GPR150Q8NGU9 434 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 OR10A4Q9H209 315 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 PCDHGA7Q9Y5G6 932 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 A0A1W2PPK0 400 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 NOTOA8MTQ0 251 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 NPIPA2E9PIF3 369 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 NPIPA3F8WFD2 350 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 C1orf61Q13536 156 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 UGT2A3Q6UWM9 527 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 DCDC5Q6ZRR9 648 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 SLC5A8Q8N695 610 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 ASCC1Q8N9N2 400 aaKnown RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 JPH3Q8WXH2 748 aaPredicted RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 MR1Q95460 341 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 BORCS8Q96FH0 119 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 CNN2Q99439 309 aaKnown RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 RANBP3Q9H6Z4 567 aaPredicted RBP15.3■□□□□ 0.04
COL2A1-202ENST00000380518 IL17CQ9P0M4 197 aa15.3■□□□□ 0.04
COL2A1-202ENST00000380518 JRKO75564 520 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 GNAO1P09471 354 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 PRSS56P0CW18 603 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 NFE2L1Q14494 772 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 CST6Q15828 149 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 ZNF551Q7Z340 670 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 MRPL10Q7Z7H8 261 aaKnown RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 CBARPQ8N350 705 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 RABL2AQ9UBK7 228 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 GLS2Q9UI32 602 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 RABL2BQ9UNT1 228 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 SPO11Q9Y5K1 396 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 RAD51DO75771 328 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 RGS9O75916 674 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 GPR4P46093 362 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 SGCAQ16586 387 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 ADAMTS18Q8TE60 1221 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 NINJ1Q92982 152 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 GSTO2Q9H4Y5 243 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 GPR83Q9NYM4 423 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 EBF1Q9UH73 591 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 CD8B2A6NJW9 211 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 CD8BP10966 210 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 C5AR1P21730 350 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 FBLP22087 321 aaKnown RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 SOX9P48436 509 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 MECP2P51608 486 aaKnown RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 HSD11B2P80365 405 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 LSAMPQ13449 338 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-202ENST00000380518 CHRFAM7AQ494W8 412 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 FIGNL1Q6PIW4 674 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 LRFN4Q6PJG9 635 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 SSX6Q7RTT6 188 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 ZNF559Q9BR84 538 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 CREBZFQ9NS37 354 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 PPP4R1LQ9P1A2 415 aa15.29■□□□□ 0.04
COL2A1-202ENST00000380518 UGDHO60701 494 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms